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The map label for this gene is ygeX [H]

Identifier: 238921388

GI number: 238921388

Start: 3430973

End: 3432172

Strand: Reverse

Name: ygeX [H]

Synonym: NT01EI_3532

Alternate gene names: 238921388

Gene position: 3432172-3430973 (Counterclockwise)

Preceding gene: 238921389

Following gene: 238921387

Centisome position: 90.03

GC content: 58.83

Gene sequence:

>1200_bases
ATGTCTGTTTTCTCGCTGAAGGTGGATATTGCGCAAAACCGTTTCTTCAATGGTGAAACGTCGCCACTGTTCTCCCGCGC
CGAAGCGCAGAAAGCGCGGGCCTTTCATAAAAAAATCACTGGCTACCGTCCTACGCCGCTGTATGCCCTGGATGAACTGT
CACACCTGTTTGGCATTGGCAAGATCCTGGTGAAGGATGAGTCGCAGCGCTTTGGCCTGAACGCTTTCAAGATGTTGGGT
GGTGCCTACGCGATTGCACGTCTGCTGTGCGAAAAGTATCACATGGATATTAATGACTTCTCCTTCGAGAAGCTCAAGTC
CACTCTGACCGAGCGGATGACCTTTGCCACCACTACCGATGGCAACCACGGTCGCGGCGTGGCCTGGGCGGCAGCGCAAC
TGGGGCAGCACGCCGTGGTGTACATGCCCAAGGGATCGGCGCGCGAACGTGTGGAGCATATCCGTAACCTGGGCGCTGAG
TGTATCGTCACGGATATGAACTATGACGATACCGTGCGTCTGACCATGAAGACGGCGCAGGAGCGCGGCTGGGAGGTGGT
ACAGGATACCGCCTGGAAGGGTTATACCAAGATCCCGACCTGGATCATGCAGGGGTATGCCACGCTGGCGGATGAAGCGG
TAGAGCAGATGACGCAGATGGGTATTGCCCGTCCAACCCACGTCTTCCTGCAGGCCGGCGTTGGTGCCATGGCCGGTGGA
GTGCTGGGCTATCTGGTCGACGTCTACGGGGCACAGAATCTGCACTCGGTGATTGTCGAGCCGGATCTGGCGGATTGCGT
GTTCCGCTCCGGTGTGAAGGGCGAGATCGTCAATGTCGGCGGCGACATGGCCACCATCATGGCAGGTCTGGCCTGCGGAG
AACCTAACCCGCTGGGCTGGCCACTGCTGCGCAATTGCGCCACCCAGTTTATCTCCTGTCAGGACAAGGTGGCTGCGCTG
GGCATGCGCGTTCTGGGCAACCCGCTGGGTCAGGATGCCCGCATCATCTCCGGCGAGTCGGGCGCCGTCGGCCTAGGGAT
TCTGGCCGCCGTCCATCACCATCCGCGCCGCGAAGAGCTAATGAAGGCGTTGGGGCTGAACCGTGACTCCGTAGTGCTGC
TGATCAGTACTGAAGGGGATACCGATGTGAAGCACTACCGTGAAGTGGTTTGGGAAGGAAAATACCCGGCGTGTGAATAA

Upstream 100 bases:

>100_bases
CAAGGAAGCCCAGAAGCGTATTAAGTAACACTGTCGGCCGGCCGAGTGGGCCGGCCTTTCCGCCAGCGCGGATTTCTTAT
TCGATGGATGAGGTTGGGTT

Downstream 100 bases:

>100_bases
GCGCGGGGGCATCGTTGAATTCATGTTCCCCGCCCGGCGGGGGGATCACCACTGGAGAAGAATATAATGGCTAAGCAAGT
TCCGTTCGATATGATTCTGG

Product: diaminopropionate ammonia-lyase

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSVFSLKVDIAQNRFFNGETSPLFSRAEAQKARAFHKKITGYRPTPLYALDELSHLFGIGKILVKDESQRFGLNAFKMLG
GAYAIARLLCEKYHMDINDFSFEKLKSTLTERMTFATTTDGNHGRGVAWAAAQLGQHAVVYMPKGSARERVEHIRNLGAE
CIVTDMNYDDTVRLTMKTAQERGWEVVQDTAWKGYTKIPTWIMQGYATLADEAVEQMTQMGIARPTHVFLQAGVGAMAGG
VLGYLVDVYGAQNLHSVIVEPDLADCVFRSGVKGEIVNVGGDMATIMAGLACGEPNPLGWPLLRNCATQFISCQDKVAAL
GMRVLGNPLGQDARIISGESGAVGLGILAAVHHHPRREELMKALGLNRDSVVLLISTEGDTDVKHYREVVWEGKYPACE

Sequences:

>Translated_399_residues
MSVFSLKVDIAQNRFFNGETSPLFSRAEAQKARAFHKKITGYRPTPLYALDELSHLFGIGKILVKDESQRFGLNAFKMLG
GAYAIARLLCEKYHMDINDFSFEKLKSTLTERMTFATTTDGNHGRGVAWAAAQLGQHAVVYMPKGSARERVEHIRNLGAE
CIVTDMNYDDTVRLTMKTAQERGWEVVQDTAWKGYTKIPTWIMQGYATLADEAVEQMTQMGIARPTHVFLQAGVGAMAGG
VLGYLVDVYGAQNLHSVIVEPDLADCVFRSGVKGEIVNVGGDMATIMAGLACGEPNPLGWPLLRNCATQFISCQDKVAAL
GMRVLGNPLGQDARIISGESGAVGLGILAAVHHHPRREELMKALGLNRDSVVLLISTEGDTDVKHYREVVWEGKYPACE
>Mature_398_residues
SVFSLKVDIAQNRFFNGETSPLFSRAEAQKARAFHKKITGYRPTPLYALDELSHLFGIGKILVKDESQRFGLNAFKMLGG
AYAIARLLCEKYHMDINDFSFEKLKSTLTERMTFATTTDGNHGRGVAWAAAQLGQHAVVYMPKGSARERVEHIRNLGAEC
IVTDMNYDDTVRLTMKTAQERGWEVVQDTAWKGYTKIPTWIMQGYATLADEAVEQMTQMGIARPTHVFLQAGVGAMAGGV
LGYLVDVYGAQNLHSVIVEPDLADCVFRSGVKGEIVNVGGDMATIMAGLACGEPNPLGWPLLRNCATQFISCQDKVAALG
MRVLGNPLGQDARIISGESGAVGLGILAAVHHHPRREELMKALGLNRDSVVLLISTEGDTDVKHYREVVWEGKYPACE

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=395, Percent_Identity=81.7721518987342, Blast_Score=691, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 43741; Mature: 43610

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFSLKVDIAQNRFFNGETSPLFSRAEAQKARAFHKKITGYRPTPLYALDELSHLFGIG
CCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
KILVKDESQRFGLNAFKMLGGAYAIARLLCEKYHMDINDFSFEKLKSTLTERMTFATTTD
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECC
GNHGRGVAWAAAQLGQHAVVYMPKGSARERVEHIRNLGAECIVTDMNYDDTVRLTMKTAQ
CCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHH
ERGWEVVQDTAWKGYTKIPTWIMQGYATLADEAVEQMTQMGIARPTHVFLQAGVGAMAGG
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHH
VLGYLVDVYGAQNLHSVIVEPDLADCVFRSGVKGEIVNVGGDMATIMAGLACGEPNPLGW
HHHHHHHHHCCCCHHHEEECCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC
PLLRNCATQFISCQDKVAALGMRVLGNPLGQDARIISGESGAVGLGILAAVHHHPRREEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHH
MKALGLNRDSVVLLISTEGDTDVKHYREVVWEGKYPACE
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SVFSLKVDIAQNRFFNGETSPLFSRAEAQKARAFHKKITGYRPTPLYALDELSHLFGIG
CEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
KILVKDESQRFGLNAFKMLGGAYAIARLLCEKYHMDINDFSFEKLKSTLTERMTFATTTD
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECC
GNHGRGVAWAAAQLGQHAVVYMPKGSARERVEHIRNLGAECIVTDMNYDDTVRLTMKTAQ
CCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHH
ERGWEVVQDTAWKGYTKIPTWIMQGYATLADEAVEQMTQMGIARPTHVFLQAGVGAMAGG
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHH
VLGYLVDVYGAQNLHSVIVEPDLADCVFRSGVKGEIVNVGGDMATIMAGLACGEPNPLGW
HHHHHHHHHCCCCHHHEEECCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC
PLLRNCATQFISCQDKVAALGMRVLGNPLGQDARIISGESGAVGLGILAAVHHHPRREEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHH
MKALGLNRDSVVLLISTEGDTDVKHYREVVWEGKYPACE
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]