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The map label for this gene is 238921244

Identifier: 238921244

GI number: 238921244

Start: 3273902

End: 3274405

Strand: Reverse

Name: 238921244

Synonym: NT01EI_3387

Alternate gene names: NA

Gene position: 3274405-3273902 (Counterclockwise)

Preceding gene: 238921245

Following gene: 238921243

Centisome position: 85.89

GC content: 56.35

Gene sequence:

>504_bases
ATGATTCTCGATCGGATCAAAAAAATCGTCGACCGCAGTATCGCCTCGTTTGCGGTGGTGGTGATGGTGGCGCTGGTGGC
CTGCGTTGTCTGGCAGGTATTCAGCCGTTATGTGCTCAGTCAGCCCAGCACGCTGACCGATGAACTGGCGCGTTTTCTGA
TGATTTGGGTCGGCCTGCTGGGTGCCGCCTATACCGTGGGCGCCCAGCGCCACCTCTCAATTGATCTGCTGGCGATGTCG
GTCAGTGCCCGCACCCAGGCCGCGCTGAGCGTGCTGGTCAATCTGCTGGTGATGGTGTTCTCGTTCCTGGTAATGATCGT
CGGCGGACGAATGCTGATCGACAAGACCCTGGAGACGGCGCAGCTGTCGGCGGCGATGCAGATCCCGATGGGGTATGTCT
ATTTTATTCTGCCGCTGAGCGGCGCCATCATCATTTTTTATAGTCTGTACTTTGTGATCAGTGGAATGAAGAAACTGGCC
ATCCCGCAAGGAGTGAATAACTGA

Upstream 100 bases:

>100_bases
TGCGCTGCTGGACAAGTTTGAAGCCGCCGCGCAGTAATGCCGTTATGCGCGGGCGAGAGAGACGCCCGCGCCGTTTCATC
CCGCTATTTGGATAGACCGT

Downstream 100 bases:

>100_bases
TGGAGAGCTATATCGCCCTGACCCTGTTTGGCAGCTTCTTCTTTCTGGTGTTTGTCGGTGTGCCGATTTCATTCTCTATC
GGTATCGCCACCTTTGCCTC

Product: tripartite ATP-independent periplasmic transporter DctQ component

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transport System; Aspartate Kinase Monofunctional Class; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Inner Membrane Protein; TRAP Transporter Small Transmembrane Protein; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MILDRIKKIVDRSIASFAVVVMVALVACVVWQVFSRYVLSQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLLAMS
VSARTQAALSVLVNLLVMVFSFLVMIVGGRMLIDKTLETAQLSAAMQIPMGYVYFILPLSGAIIIFYSLYFVISGMKKLA
IPQGVNN

Sequences:

>Translated_167_residues
MILDRIKKIVDRSIASFAVVVMVALVACVVWQVFSRYVLSQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLLAMS
VSARTQAALSVLVNLLVMVFSFLVMIVGGRMLIDKTLETAQLSAAMQIPMGYVYFILPLSGAIIIFYSLYFVISGMKKLA
IPQGVNN
>Mature_167_residues
MILDRIKKIVDRSIASFAVVVMVALVACVVWQVFSRYVLSQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLLAMS
VSARTQAALSVLVNLLVMVFSFLVMIVGGRMLIDKTLETAQLSAAMQIPMGYVYFILPLSGAIIIFYSLYFVISGMKKLA
IPQGVNN

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18324; Mature: 18324

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDRIKKIVDRSIASFAVVVMVALVACVVWQVFSRYVLSQPSTLTDELARFLMIWVGLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GAAYTVGAQRHLSIDLLAMSVSARTQAALSVLVNLLVMVFSFLVMIVGGRMLIDKTLETA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QLSAAMQIPMGYVYFILPLSGAIIIFYSLYFVISGMKKLAIPQGVNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MILDRIKKIVDRSIASFAVVVMVALVACVVWQVFSRYVLSQPSTLTDELARFLMIWVGLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GAAYTVGAQRHLSIDLLAMSVSARTQAALSVLVNLLVMVFSFLVMIVGGRMLIDKTLETA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QLSAAMQIPMGYVYFILPLSGAIIIFYSLYFVISGMKKLAIPQGVNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA