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The map label for this gene is yiiZ [H]

Identifier: 238921245

GI number: 238921245

Start: 3274469

End: 3275455

Strand: Reverse

Name: yiiZ [H]

Synonym: NT01EI_3388

Alternate gene names: 238921245

Gene position: 3275455-3274469 (Counterclockwise)

Preceding gene: 238921253

Following gene: 238921244

Centisome position: 85.92

GC content: 54.81

Gene sequence:

>987_bases
ATGAAACTGAAAACTTTTTCCCGTCATATCCTCTGTGCGGCCGTGCTTTCTCTGATTGCTGGCGGCGCACAGGCAGCAGA
GAAAGTCACACTGAAACTGGCTCATAACCTCGAACGCAGCCACGTAGTACATCAGGCATTCGAGCAGATGGCAAAAGAGG
TACAACAACTTTCTAACGGCAATATGCGCATTCGTATTTACCCCAGCAGCCAGATGGGCAGTGCCCGTGAAACGCTGGAG
CTTCTGCAGAACGGCGCACTGGATATGACCAAAGGCTCCGGCAGTGATTTGGAGTCATTTGATAATATTTACGCCATCTA
TAACATGCCGTACCTGTTTAAGGATCAGCAGCACTTTAATAACGTTGTCTATGGTCCGGTCGGCAAGGAGATTATGGATT
CCACCAAGGATAAAGGCTTTTTCGCCATGTCCGCCTACGTTGCCGGTACCCGCAGTTTCTATGCCAAGAAACCGATTACC
TCTCCGGCCGACCTGAAGGGGCTGAAAATCCGTGTTCAGGCCAGCCCGACCACCATCAAGATGGTCGAACTGATGGGCGG
CTCCCCGACGCCGATCTCCTTCGGCGAAGTGTATACCGCTATGCAGCAGGGCGTGGTGGATGGTGCGGAAAACAACATCC
CGTCCTGGGTACAGACCCGCCACATCGAAATCGCCAACGTCCTGTCTGAAGATGAGCACGCCTCGATTCCGGATTACCTG
GTCATCGCCACTAAAACCTGGGAGAAGTTGACCCCGGAGCAACAGGCCATCCTGACCAAAGCTGCCCGCAATTCTGAGGT
CTACCAGCAGAAACTGTGGGATAAGGTCGATGCCGAGTCCCGCGCACAGGCCAAAGCGATGGGTGCCAGCATCGTCAGCG
TAGACAAGGCGCCGTTCCGCGCCGCCGTACAGCCGTTGTATGACGAGTTCCGCAAGGATCCGCAGCAGGCTGCGCTGCTG
GACAAGTTTGAAGCCGCCGCGCAGTAA

Upstream 100 bases:

>100_bases
CGATAGCTAAAATAAGATGTCATACAGAAATTGGCGTAATCACTTATTTGTTCAGACCAAAAGTAACACATATTCAACCA
ATATCAGGGAGCCTTGCCAT

Downstream 100 bases:

>100_bases
TGCCGTTATGCGCGGGCGAGAGAGACGCCCGCGCCGTTTCATCCCGCTATTTGGATAGACCGTATGATTCTCGATCGGAT
CAAAAAAATCGTCGACCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKLKTFSRHILCAAVLSLIAGGAQAAEKVTLKLAHNLERSHVVHQAFEQMAKEVQQLSNGNMRIRIYPSSQMGSARETLE
LLQNGALDMTKGSGSDLESFDNIYAIYNMPYLFKDQQHFNNVVYGPVGKEIMDSTKDKGFFAMSAYVAGTRSFYAKKPIT
SPADLKGLKIRVQASPTTIKMVELMGGSPTPISFGEVYTAMQQGVVDGAENNIPSWVQTRHIEIANVLSEDEHASIPDYL
VIATKTWEKLTPEQQAILTKAARNSEVYQQKLWDKVDAESRAQAKAMGASIVSVDKAPFRAAVQPLYDEFRKDPQQAALL
DKFEAAAQ

Sequences:

>Translated_328_residues
MKLKTFSRHILCAAVLSLIAGGAQAAEKVTLKLAHNLERSHVVHQAFEQMAKEVQQLSNGNMRIRIYPSSQMGSARETLE
LLQNGALDMTKGSGSDLESFDNIYAIYNMPYLFKDQQHFNNVVYGPVGKEIMDSTKDKGFFAMSAYVAGTRSFYAKKPIT
SPADLKGLKIRVQASPTTIKMVELMGGSPTPISFGEVYTAMQQGVVDGAENNIPSWVQTRHIEIANVLSEDEHASIPDYL
VIATKTWEKLTPEQQAILTKAARNSEVYQQKLWDKVDAESRAQAKAMGASIVSVDKAPFRAAVQPLYDEFRKDPQQAALL
DKFEAAAQ
>Mature_328_residues
MKLKTFSRHILCAAVLSLIAGGAQAAEKVTLKLAHNLERSHVVHQAFEQMAKEVQQLSNGNMRIRIYPSSQMGSARETLE
LLQNGALDMTKGSGSDLESFDNIYAIYNMPYLFKDQQHFNNVVYGPVGKEIMDSTKDKGFFAMSAYVAGTRSFYAKKPIT
SPADLKGLKIRVQASPTTIKMVELMGGSPTPISFGEVYTAMQQGVVDGAENNIPSWVQTRHIEIANVLSEDEHASIPDYL
VIATKTWEKLTPEQQAILTKAARNSEVYQQKLWDKVDAESRAQAKAMGASIVSVDKAPFRAAVQPLYDEFRKDPQQAALL
DKFEAAAQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=324, Percent_Identity=27.4691358024691, Blast_Score=140, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36251; Mature: 36251

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTFSRHILCAAVLSLIAGGAQAAEKVTLKLAHNLERSHVVHQAFEQMAKEVQQLSNG
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
NMRIRIYPSSQMGSARETLELLQNGALDMTKGSGSDLESFDNIYAIYNMPYLFKDQQHFN
CEEEEEECCCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHCEEEEECCCEEECCHHHHC
NVVYGPVGKEIMDSTKDKGFFAMSAYVAGTRSFYAKKPITSPADLKGLKIRVQASPTTIK
CEEECCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEE
MVELMGGSPTPISFGEVYTAMQQGVVDGAENNIPSWVQTRHIEIANVLSEDEHASIPDYL
EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEE
VIATKTWEKLTPEQQAILTKAARNSEVYQQKLWDKVDAESRAQAKAMGASIVSVDKAPFR
EEEECCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCHHEECCCCHHH
AAVQPLYDEFRKDPQQAALLDKFEAAAQ
HHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLKTFSRHILCAAVLSLIAGGAQAAEKVTLKLAHNLERSHVVHQAFEQMAKEVQQLSNG
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
NMRIRIYPSSQMGSARETLELLQNGALDMTKGSGSDLESFDNIYAIYNMPYLFKDQQHFN
CEEEEEECCCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHCEEEEECCCEEECCHHHHC
NVVYGPVGKEIMDSTKDKGFFAMSAYVAGTRSFYAKKPITSPADLKGLKIRVQASPTTIK
CEEECCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEE
MVELMGGSPTPISFGEVYTAMQQGVVDGAENNIPSWVQTRHIEIANVLSEDEHASIPDYL
EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEE
VIATKTWEKLTPEQQAILTKAARNSEVYQQKLWDKVDAESRAQAKAMGASIVSVDKAPFR
EEEECCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCHHEECCCCHHH
AAVQPLYDEFRKDPQQAALLDKFEAAAQ
HHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]