Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is gltJ [H]

Identifier: 238920804

GI number: 238920804

Start: 2819885

End: 2820625

Strand: Direct

Name: gltJ [H]

Synonym: NT01EI_2930

Alternate gene names: 238920804

Gene position: 2819885-2820625 (Clockwise)

Preceding gene: 238920803

Following gene: 238920805

Centisome position: 73.97

GC content: 58.97

Gene sequence:

>741_bases
ATGTCTATCGATTGGAACTGGGGCATCTTTCTGCAACCGGCCCCTTTTGGCGGCACCACTTACCTGGGCTGGATCTGGTC
CGGCATGCAGGTCACCATCGCCCTGTCGCTCGCTGCCTGGGTTATCGCCTTTGTACTCGGCTCCCTGCTGGGCATATTGC
GGACCCTGCCCAGCCGTCCGCTGGCCATGATTGGCGCGATCTATGTCGAGCTGTTCCGCAATGTTCCGCTGATCGTGCAG
TTTTTTACCTGGTATCTGGTGGTGCCGGAGCTGCTGCCGACCGACTGGGGCAACTGGTTTAAAGGGGAGCTTGACCCGTC
CATCCAATTTTTTGTCTCCTCGCTGCTCTGTCTCGGTCTGTTTACCGCCGCCCGGATCTGCGAACAGGTACGCGCCGCCA
TTCAGTCTCTGCCGGCCGGACAGCGGAGCGCCGGGCTGGCCATGGGCTTCACCCTGCCACAGACCTACCGCTATGTTCTG
CTGCCCAACGCCTATCGGGTCATTGTGCCGCCGCTGACCTCTGAAATGCTCAATCTGGTGAAGAACTCCGCCATCGCCTC
CACCATTGGCCTGATGGATATGGCCGCACAGGCCGGCAAGTTGCTGGACTATTCGGCACACGCCTATGAATCGTTTACCG
CTATCACGCTGGCCTACATCGCCATCAATGCCCTGCTAATGCTGGGCATGCATCTGCTGGAACGGCATCTGCAATTGCCT
GGCAGTATGAGGAGCCATTAA

Upstream 100 bases:

>100_bases
AGCCCGGCCTCAGGCCATCGCGCGGACCCCCCGTCCGCGCGATGGCGCGCGCATCTGCGGCGCCCCCGAGCGACGGGGGG
CCGGCTAACCGGAGTCACCT

Downstream 100 bases:

>100_bases
TGTACGCATTTGACTGGAGTTCCATTGTCCCCAGCCTGCCCTACCTGCTGGATGGGTTGGTTATCACGCTGAAGATAACG
CTGACAGCGGTGGTAGTCGG

Product: polar amino acid ABC transporter, inner membrane subunit

Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSIDWNWGIFLQPAPFGGTTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRPLAMIGAIYVELFRNVPLIVQ
FFTWYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGLFTAARICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVL
LPNAYRVIVPPLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGMHLLERHLQLP
GSMRSH

Sequences:

>Translated_246_residues
MSIDWNWGIFLQPAPFGGTTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRPLAMIGAIYVELFRNVPLIVQ
FFTWYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGLFTAARICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVL
LPNAYRVIVPPLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGMHLLERHLQLP
GSMRSH
>Mature_245_residues
SIDWNWGIFLQPAPFGGTTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRPLAMIGAIYVELFRNVPLIVQF
FTWYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGLFTAARICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVLL
PNAYRVIVPPLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGMHLLERHLQLPG
SMRSH

Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786874, Length=243, Percent_Identity=79.8353909465021, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1788226, Length=198, Percent_Identity=32.8282828282828, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786873, Length=215, Percent_Identity=27.906976744186, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=40, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=26.2910798122066, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=28.7735849056604, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=27.9816513761468, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI87082239, Length=169, Percent_Identity=26.6272189349112, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=24.5454545454545, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788646, Length=181, Percent_Identity=28.7292817679558, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27183; Mature: 27051

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDWNWGIFLQPAPFGGTTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRP
CCCCCCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LAMIGAIYVELFRNVPLIVQFFTWYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FTAARICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVLLPNAYRVIVPPLTSEMLNLV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHEEEEECCCCCEEEECCHHHHHHHHH
KNSAIASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGMHLLERHLQLP
HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSMRSH
CCCCCC
>Mature Secondary Structure 
SIDWNWGIFLQPAPFGGTTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRP
CCCCCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LAMIGAIYVELFRNVPLIVQFFTWYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FTAARICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVLLPNAYRVIVPPLTSEMLNLV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHEEEEECCCCCEEEECCHHHHHHHHH
KNSAIASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGMHLLERHLQLP
HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSMRSH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamate [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]