| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is gltK [H]
Identifier: 238920805
GI number: 238920805
Start: 2820625
End: 2821302
Strand: Direct
Name: gltK [H]
Synonym: NT01EI_2931
Alternate gene names: 238920805
Gene position: 2820625-2821302 (Clockwise)
Preceding gene: 238920804
Following gene: 238920806
Centisome position: 73.99
GC content: 59.14
Gene sequence:
>678_bases ATGTACGCATTTGACTGGAGTTCCATTGTCCCCAGCCTGCCCTACCTGCTGGATGGGTTGGTTATCACGCTGAAGATAAC GCTGACAGCGGTGGTAGTCGGCATTCTATGGGGAACCCTGCTGGCCGTAATGCGGCTGTCACGCTGGAAACCCCTCGCCT GGCTGGCGGCCCTGTATGTCAATCTGTTCCGCTCGGTACCGCTGGTGATGGTGCTGCTGTGGTTCTATCTGGTGGTACCC AGCCTGCTACAGCGCTTTCTCGGCCTGTCGCCGCAAAGCGATATCCGTCTTATCTCGGCGATGGTGGCCTTTGCGCTGTT CGAAGCCGCCTACTACTCGGAGATTATCCGCGCCGGTATCAAGAGCGTTGCGCGCGGACAGAACGCCGCCGCACTGGCGC TGGGCATGACTCCCTGGCAATCCATGTATCTGGTCATCCTGCCACAGGCGTTCCGCGCCATGGTGCCGCTGCTGCTGACG CAGGGTATCGTGCTGTTTCAGGACACCTCATTGGTGTACGTTTTGAGTCTGGCGGACTTCTTCCGTACCGCCTCCACCAT CGGCGAGCGCGATGGCACCCAGCTGGAAATGATCCTGTTTGCCGGCGCCGTCTACTTCATCATCAGCCTCAGCGCCTCGC TGCTGGTCGGCCATCTCAAGAAAAGGAGTACCTTATGA
Upstream 100 bases:
>100_bases CTATCACGCTGGCCTACATCGCCATCAATGCCCTGCTAATGCTGGGCATGCATCTGCTGGAACGGCATCTGCAATTGCCT GGCAGTATGAGGAGCCATTA
Downstream 100 bases:
>100_bases TCTCCCTGCAACAGGTCAGTAAATGGTATGGGCAGTTTCAGGTGCTGAACGACTGCAGCACCCACGTCGACAAAGGCGAG GTGGTGGTGGTTTGCGGTCC
Product: glutamate-aspartate transport system permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MYAFDWSSIVPSLPYLLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLWFYLVVP SLLQRFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALGMTPWQSMYLVILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQLEMILFAGAVYFIISLSASLLVGHLKKRSTL
Sequences:
>Translated_225_residues MYAFDWSSIVPSLPYLLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLWFYLVVP SLLQRFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALGMTPWQSMYLVILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQLEMILFAGAVYFIISLSASLLVGHLKKRSTL >Mature_225_residues MYAFDWSSIVPSLPYLLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLWFYLVVP SLLQRFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALGMTPWQSMYLVILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQLEMILFAGAVYFIISLSASLLVGHLKKRSTL
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=83.4080717488789, Blast_Score=378, Evalue=1e-106, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=38.3177570093458, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=33.1730769230769, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1787030, Length=222, Percent_Identity=30.1801801801802, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786874, Length=172, Percent_Identity=32.5581395348837, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787087, Length=219, Percent_Identity=26.9406392694064, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI48994930, Length=122, Percent_Identity=35.2459016393443, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1788645, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=24.6445497630332, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=23.1481481481481, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24939; Mature: 24939
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAFDWSSIVPSLPYLLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYV CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NLFRSVPLVMVLLWFYLVVPSLLQRFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSVARGQNAAALALGMTPWQSMYLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHH FRTASTIGERDGTQLEMILFAGAVYFIISLSASLLVGHLKKRSTL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYAFDWSSIVPSLPYLLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYV CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NLFRSVPLVMVLLWFYLVVPSLLQRFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSVARGQNAAALALGMTPWQSMYLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHH FRTASTIGERDGTQLEMILFAGAVYFIISLSASLLVGHLKKRSTL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]