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The map label for this gene is ypjD [H]

Identifier: 238896057

GI number: 238896057

Start: 4024763

End: 4025554

Strand: Direct

Name: ypjD [H]

Synonym: KP1_4190

Alternate gene names: 238896057

Gene position: 4024763-4025554 (Clockwise)

Preceding gene: 238896049

Following gene: 238896058

Centisome position: 76.68

GC content: 56.82

Gene sequence:

>792_bases
ATGCCTGTTTTTGCTCTACTCGCCCTTGTCGCCTACTCCGTCAGCCTCGCGCTGATTATCCCCGGCTTGCTGCAAAAAAA
CAGCAGCTGGCGGCGAATGGCGATTTTATCTGCAACTATCGCCTTGATCTGCCATGCTTTTGCGCTGGAAGCACGGATAT
TCCCCGGCGGCGAGAGCGGGCAAAATCTCAGCTTACTGAACGTCGGGTCGCTGGTCAGCCTGATGATCTGTACGGTGATG
ACTATCGTGGCCTCGCGCAATCGCGGCTGGCTGCTGCTGCCTATCGTCTATGCCTTCGCGCTGATCAACCTGGCCTTCGC
CACATTCGTGCCTAACGAATATATCACCCACCTGGAAACCACCCCGGGGATGCTGGTGCATATCGGCCTGTCGCTCTTCT
CGTACGCCACGCTGATCATTGCCGCGCTGTATGCGTTGCAGCTGGCGTGGATCGACTACCAGCTCAAGAATAAAAAGCTG
GCCTTCAGCAGCGAAATGCCGCCGCTGATGAGCATTGAGCGCAAAATGTTCCACATCACCCAGGTCGGCGTGGTGCTGCT
GACCCTGACGCTGTGCAGCGGCCTGTTCTACATGCACAATCTGTTCAGCAGCGAAAATATCGATAAAGCGGTGCTGTCGA
TTATTGCGTGGTTCGTCTATATCGTCCTGCTGTGGGGGCACTATCATGAAGGGTGGCGCGGACGTCGTGTGGTCTGGTTC
AGCGTCGCTGGCGCCGGTCTGCTGACGCTGGCCTATTTTGGTAGCCGCGTGCTGCAGCAGTTCGTGAGCTAA

Upstream 100 bases:

>100_bases
GTATAACACGACATCAATCTGAATGTGCTGCAACGGTTGGAGCAGAGGCCTGCTAACGTTATACTGCTTCTCTTTCTTAT
TTAGCCAACAGCCGACACCT

Downstream 100 bases:

>100_bases
GTCTTTTAAGGAATCCTACGTGGAACATATCTCCACCACCACGCTGATCATAACGCTGATCGTCATGGTGATTATCTCTG
CCTATTTCTCCGGTTCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MPVFALLALVAYSVSLALIIPGLLQKNSSWRRMAILSATIALICHAFALEARIFPGGESGQNLSLLNVGSLVSLMICTVM
TIVASRNRGWLLLPIVYAFALINLAFATFVPNEYITHLETTPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
AFSSEMPPLMSIERKMFHITQVGVVLLTLTLCSGLFYMHNLFSSENIDKAVLSIIAWFVYIVLLWGHYHEGWRGRRVVWF
SVAGAGLLTLAYFGSRVLQQFVS

Sequences:

>Translated_263_residues
MPVFALLALVAYSVSLALIIPGLLQKNSSWRRMAILSATIALICHAFALEARIFPGGESGQNLSLLNVGSLVSLMICTVM
TIVASRNRGWLLLPIVYAFALINLAFATFVPNEYITHLETTPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
AFSSEMPPLMSIERKMFHITQVGVVLLTLTLCSGLFYMHNLFSSENIDKAVLSIIAWFVYIVLLWGHYHEGWRGRRVVWF
SVAGAGLLTLAYFGSRVLQQFVS
>Mature_262_residues
PVFALLALVAYSVSLALIIPGLLQKNSSWRRMAILSATIALICHAFALEARIFPGGESGQNLSLLNVGSLVSLMICTVMT
IVASRNRGWLLLPIVYAFALINLAFATFVPNEYITHLETTPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLA
FSSEMPPLMSIERKMFHITQVGVVLLTLTLCSGLFYMHNLFSSENIDKAVLSIIAWFVYIVLLWGHYHEGWRGRRVVWFS
VAGAGLLTLAYFGSRVLQQFVS

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693174, Length=263, Percent_Identity=90.1140684410646, Blast_Score=469, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 29233; Mature: 29102

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVFALLALVAYSVSLALIIPGLLQKNSSWRRMAILSATIALICHAFALEARIFPGGESG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
QNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFVPNEYITHLET
CCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
TPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSSEMPPLMSIERKMFHIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH
QVGVVLLTLTLCSGLFYMHNLFSSENIDKAVLSIIAWFVYIVLLWGHYHEGWRGRRVVWF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
SVAGAGLLTLAYFGSRVLQQFVS
EECCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PVFALLALVAYSVSLALIIPGLLQKNSSWRRMAILSATIALICHAFALEARIFPGGESG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
QNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFVPNEYITHLET
CCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
TPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSSEMPPLMSIERKMFHIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH
QVGVVLLTLTLCSGLFYMHNLFSSENIDKAVLSIIAWFVYIVLLWGHYHEGWRGRRVVWF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
SVAGAGLLTLAYFGSRVLQQFVS
EECCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]