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The map label for this gene is yfjD [H]

Identifier: 238896058

GI number: 238896058

Start: 4025598

End: 4026860

Strand: Direct

Name: yfjD [H]

Synonym: KP1_4191

Alternate gene names: 238896058

Gene position: 4025598-4026860 (Clockwise)

Preceding gene: 238896057

Following gene: 238896060

Centisome position: 76.7

GC content: 56.69

Gene sequence:

>1263_bases
CTGATCATAACGCTGATCGTCATGGTGATTATCTCTGCCTATTTCTCCGGTTCCGAAACCGGCATGATGACGCTGAACCG
CTACCGGTTGCGCCACATGGCGAAACAAGGCAACCGCCCCGCCAAGCGCGTGGAGAAGCTGCTGCGCAAGCCGGACCGCC
TGATTAGCCTCGTGCTGATCGGCAATAACCTTGTCAACATTCTCGCCTCGGCGCTGGGCACCATCGTCGGCATGCGCCTG
TACGGCGACGCCGGCGTCGCGATCGCCACCGGCGTACTTACCTTTGTGGTGCTGGTATTTGCCGAAGTGCTGCCGAAGAC
CATCGCCGCCCTCTATCCGGAAAAGGTTGCCTACCCCAGCAGCTTCCTGTTGGCGCCCCTGCAGGTGCTGATGATGCCGC
TGGTGTGGCTGCTGAATACCATCACCCGCATACTGATGCGCATGATGGGCATCCGCACCGATACCGTCATCAGCAGCGCC
CTGAGCAAAGATGAACTGCGCACGATTGTGAATGAATCCCGTTCACAAATCTCACGACGTAATCAGGATATGCTGCTGTC
GGTGCTGGACCTGGAGAAGGTCAGCGTTAACGACATCATGGTGCCGCGCAATGAGATTGTCGGCATCGACATCAATGATG
ACTGGAAATCTATCGTCCGCCAGCTGACCCACTCCCCGCATGGCCGCATCGTGCTCTACCGCGATTCGCTGGACGATGCC
ATCAGCATGCTGCGCGTTCGCGAAGCCTACCGTCTGATGACGGAGAAGAAAGAGTTCACAAAAGAGATCATGCTGCGGGC
GGCAGATGAGATCTACTTTGTGCCGGAAGGCACGCCGCTCAGCACCCAGCTGGTGAAATTTCAGCGCAATAAAAAGAAAG
TCGGTCTGGTGGTCGATGAATACGGCGATATTCAGGGGCTTGTCACCGTCGAAGATATTCTTGAAGAGATTGTCGGCGAC
TTCACCACCTCCATGTCACCCACCCTGGCGGAGGAAGTGACCCCGCTTAACGACGGCACGGTGATTATCGACGGCAGCGC
CAACGTTCGCGAAATCAACAAAGCGTTTAACTGGCACCTGCCGGAAGATGAAGCGCGCACCGTCAACGGTATTATCCTCG
AAGCGCTGGAAGAGATCCCGGTCCCGGGCACCCGCGTGCGCATTGAGCAGTACGATATAGATATCCTCGACGTGCAGGAC
AACATGATCAAACAGGTGAAAGTGATGCCGGTGAAATCATTACGCGAGAGCGTCGCGGAGTAG

Upstream 100 bases:

>100_bases
GGTCTGCTGACGCTGGCCTATTTTGGTAGCCGCGTGCTGCAGCAGTTCGTGAGCTAAGTCTTTTAAGGAATCCTACGTGG
AACATATCTCCACCACCACG

Downstream 100 bases:

>100_bases
CGCGAGCGAAGGAATTAATATCACGGTGGGCTGCGGCCCGCCGTTTTTTTATCTCGCGCCAGCAGCGATGACACAAAAAA
CGGCCGCCCGCAGGCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MIITLIVMVIISAYFSGSETGMMTLNRYRLRHMAKQGNRPAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRL
YGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQVLMMPLVWLLNTITRILMRMMGIRTDTVISSA
LSKDELRTIVNESRSQISRRNQDMLLSVLDLEKVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDA
ISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD
FTTSMSPTLAEEVTPLNDGTVIIDGSANVREINKAFNWHLPEDEARTVNGIILEALEEIPVPGTRVRIEQYDIDILDVQD
NMIKQVKVMPVKSLRESVAE

Sequences:

>Translated_420_residues
MIITLIVMVIISAYFSGSETGMMTLNRYRLRHMAKQGNRPAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRL
YGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQVLMMPLVWLLNTITRILMRMMGIRTDTVISSA
LSKDELRTIVNESRSQISRRNQDMLLSVLDLEKVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDA
ISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD
FTTSMSPTLAEEVTPLNDGTVIIDGSANVREINKAFNWHLPEDEARTVNGIILEALEEIPVPGTRVRIEQYDIDILDVQD
NMIKQVKVMPVKSLRESVAE
>Mature_420_residues
MIITLIVMVIISAYFSGSETGMMTLNRYRLRHMAKQGNRPAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRL
YGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQVLMMPLVWLLNTITRILMRMMGIRTDTVISSA
LSKDELRTIVNESRSQISRRNQDMLLSVLDLEKVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDA
ISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD
FTTSMSPTLAEEVTPLNDGTVIIDGSANVREINKAFNWHLPEDEARTVNGIILEALEEIPVPGTRVRIEQYDIDILDVQD
NMIKQVKVMPVKSLRESVAE

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=422, Percent_Identity=26.5402843601896, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI94681046, Length=321, Percent_Identity=25.8566978193146, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI40068055, Length=333, Percent_Identity=24.024024024024, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI40068053, Length=333, Percent_Identity=24.024024024024, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI145693175, Length=408, Percent_Identity=92.156862745098, Blast_Score=771, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=442, Percent_Identity=22.3981900452489, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1786879, Length=250, Percent_Identity=26.8, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI87082033, Length=288, Percent_Identity=26.0416666666667, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788119, Length=229, Percent_Identity=29.2576419213974, Blast_Score=77, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324512, Length=334, Percent_Identity=24.8502994011976, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47219; Mature: 47219

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITLIVMVIISAYFSGSETGMMTLNRYRLRHMAKQGNRPAKRVEKLLRKPDRLISLVLI
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEHEE
GNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPS
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCH
SFLLAPLQVLMMPLVWLLNTITRILMRMMGIRTDTVISSALSKDELRTIVNESRSQISRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQDMLLSVLDLEKVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDA
CHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCHHHH
ISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCCEEEEC
YGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPLNDGTVIIDGSANVREINKAFNWHL
CCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCC
PEDEARTVNGIILEALEEIPVPGTRVRIEQYDIDILDVQDNMIKQVKVMPVKSLRESVAE
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MIITLIVMVIISAYFSGSETGMMTLNRYRLRHMAKQGNRPAKRVEKLLRKPDRLISLVLI
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEHEE
GNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPS
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCH
SFLLAPLQVLMMPLVWLLNTITRILMRMMGIRTDTVISSALSKDELRTIVNESRSQISRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQDMLLSVLDLEKVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDA
CHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCHHHH
ISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCCEEEEC
YGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPLNDGTVIIDGSANVREINKAFNWHL
CCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCC
PEDEARTVNGIILEALEEIPVPGTRVRIEQYDIDILDVQDNMIKQVKVMPVKSLRESVAE
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]