| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is srmB [H]
Identifier: 238896027
GI number: 238896027
Start: 3988816
End: 3990147
Strand: Direct
Name: srmB [H]
Synonym: KP1_4158
Alternate gene names: 238896027
Gene position: 3988816-3990147 (Clockwise)
Preceding gene: 238896025
Following gene: 238896029
Centisome position: 76.0
GC content: 58.18
Gene sequence:
>1332_bases ATGACTGTAACGACTTTTTCCGAACTTGAACTCGACGAAAACCTGCTGGAGGCCCTCCAGGATAAAGGTTTCACTCGCCC GACAGCCATTCAGGCCGCCGCTATTCCGCCTGCGCTCGATGGCCGTGACATTCTCGGTTCAGCGCCGACCGGCACCGGTA AAACGGCGGCGTATCTGCTGCCAGCGTTGCAGCACCTGCTCGATTTCCCGCGTAAGAAATCCGGCCCGCCGCGCATTCTT ATCCTGACGCCGACCCGTGAGCTGGCGATGCAGGTGGCCGACCACGCCCGCGAGCTGGCGAAGCATACCCATCTGGACAT CGCTACCATTACCGGCGGCGTGGCGTACATGAACCACGCGGAAGTGTTCAGCGAAAACCAGGACATCGTAGTCGCCACCA CCGGTCGCCTGCTGCAATATATTAAAGAAGAGAATTTCGACTGCCGCGCCGTCGAGACCCTAATCCTCGATGAAGCCGAC CGCATGCTGGATATGGGTTTTGCCCAGGATATCGAAACCATCGCCGGTGAAACTCGCTGGCGCAAGCAGACTATGCTGTT CTCCGCGACGCTGGAAGGCGATGCGATCAAAGACTTTGCTGAGCGTCTGCTGGAGGAGCCGGTTGAAGTTTCCGCCAATC CGTCAACCCGCGAGCGTAAGAAAATCCATCAGTGGTACTACCGCGCCGACGATATCGAACATAAAACCAAACTGCTGGTG AATCTGCTGCAACAGCCGGAAGCCACCCGCGCTATCGTGTTTGTGCGTAAGCGTGAGCGCGTGCATGAGCTGGCTAACTG GCTGCGTGAGGCCGGGATTAACACCTGCTGGCTGGAAGGCGAGATGGTGCAGGCCAAGCGAAACGAAGCTATCAAGCGCC TGACCGACGGCCGCGTCAACGTGCTGATCGCCACCGACGTCGCTGCCCGCGGTATCGATATTCCGGACGTCAGCCACGTC TTTAACTTCGATATGCCGCGTACCGCGGATACCTACCTGCACCGTATCGGTCGTACCGGCCGCGCCGGTAAAAAAGGGAC CGCCATTTCTCTGGTCGAGGCTCATGACCACCTGCTGCTGGGTAAGATTGGTCGCTATATTGAAGAGCCGTTGAAAGCCA GAGTTATCGATGAACTGCGCCCGACGACCCGTGCGCCGAGCGAGAAGCTGACGGGTAAGCCATCGAAGAAAGTGCTGGCG AAGCGTGCGCAGAAGAAAAAAGATGAAAAAGAGAAACCGCGGGTGAAGAAGCGCCACCGCGATACGAAAAATATCGGTAA GCGCCGGAAGCCAAGCGCGGCCGGGACGCCATCAGCGTCCAGCGATGAGTAA
Upstream 100 bases:
>100_bases ACCTAAGGCTATGCACAATACCGGAGAACAGATAGCCTTACAAACAGATGAACATTACGTCAGTAACGTCTATAATCGGC GGCCCACTCAGAGGTAGAAC
Downstream 100 bases:
>100_bases AAAAAACGCCGGGATATCCCGGCGTTTTCACATCTGGCGTTAGCCTTACAGGCTTTCGGTAAAGGTACGGGCGATAACGT CGCGCTGCTGTTCCGGCGTC
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRIL ILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIETIAGETRWRKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVNVLIATDVAARGIDIPDVSHV FNFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLLGKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLA KRAQKKKDEKEKPRVKKRHRDTKNIGKRRKPSAAGTPSASSDE
Sequences:
>Translated_443_residues MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRIL ILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIETIAGETRWRKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVNVLIATDVAARGIDIPDVSHV FNFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLLGKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLA KRAQKKKDEKEKPRVKKRHRDTKNIGKRRKPSAAGTPSASSDE >Mature_442_residues TVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILI LTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADR MLDMGFAQDIETIAGETRWRKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLVN LLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVNVLIATDVAARGIDIPDVSHVF NFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLLGKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAK RAQKKKDEKEKPRVKKRHRDTKNIGKRRKPSAAGTPSASSDE
Specific function: RNA-dependent ATPase activity. Acts in 50S ribosomal subunit biogenesis at low temperatures, acting before DeaD/CsdA. Suppressor of a mutant defective in 50S ribosomal subunit assembly. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=37.3333333333333, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=37.0572207084469, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=37.0572207084469, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=35.8695652173913, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=36.4829396325459, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI262118318, Length=369, Percent_Identity=35.230352303523, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=36.2637362637363, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI41327771, Length=404, Percent_Identity=32.9207920792079, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=35.3932584269663, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI38201710, Length=356, Percent_Identity=35.3932584269663, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI216548263, Length=369, Percent_Identity=35.230352303523, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI262231852, Length=369, Percent_Identity=35.230352303523, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI13518015, Length=369, Percent_Identity=35.230352303523, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI164419743, Length=387, Percent_Identity=33.8501291989664, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI51094101, Length=387, Percent_Identity=33.8501291989664, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=34.4444444444444, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=33.4254143646409, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=33.9943342776204, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI222352149, Length=424, Percent_Identity=33.7264150943396, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=35.5555555555556, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=32.972972972973, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=33.4277620396601, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=33.4277620396601, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=33.6927223719677, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=32.6086956521739, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI55749865, Length=424, Percent_Identity=31.8396226415094, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI188035877, Length=373, Percent_Identity=34.3163538873995, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=32.520325203252, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=32.520325203252, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=33.4177215189873, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=32.520325203252, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=32.520325203252, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=32.9758713136729, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI38327634, Length=351, Percent_Identity=35.3276353276353, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=33.0769230769231, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=32.8205128205128, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=31.3829787234043, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=33.0623306233062, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=32.2404371584699, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=31.0344827586207, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=31.7415730337079, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI164419732, Length=385, Percent_Identity=32.987012987013, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI41327779, Length=359, Percent_Identity=33.7047353760446, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.4712643678161, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=31.1797752808989, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI17505907, Length=404, Percent_Identity=29.4554455445545, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI9966805, Length=349, Percent_Identity=29.7994269340974, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI154759257, Length=406, Percent_Identity=28.3251231527094, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI256773275, Length=381, Percent_Identity=30.7086614173228, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=29.4294294294294, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI20336298, Length=219, Percent_Identity=33.7899543378995, Blast_Score=108, Evalue=9e-24, Organism=Escherichia coli, GI1788930, Length=444, Percent_Identity=90.7657657657658, Blast_Score=773, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=404, Percent_Identity=41.8316831683168, Blast_Score=288, Evalue=5e-79, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=39.4101876675603, Blast_Score=259, Evalue=3e-70, Organism=Escherichia coli, GI1790214, Length=379, Percent_Identity=38.5224274406332, Blast_Score=247, Evalue=8e-67, Organism=Escherichia coli, GI1787605, Length=352, Percent_Identity=36.9318181818182, Blast_Score=201, Evalue=7e-53, Organism=Caenorhabditis elegans, GI17552642, Length=369, Percent_Identity=37.940379403794, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17555296, Length=353, Percent_Identity=37.3937677053824, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI86570094, Length=372, Percent_Identity=36.8279569892473, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=33.5917312661499, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=34.8901098901099, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI115533224, Length=358, Percent_Identity=36.8715083798883, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=34.5205479452055, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507877, Length=382, Percent_Identity=35.8638743455497, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=35.7894736842105, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71999646, Length=371, Percent_Identity=34.5013477088949, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71999644, Length=369, Percent_Identity=34.4173441734417, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17507945, Length=397, Percent_Identity=34.2569269521411, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=32.9700272479564, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71995514, Length=369, Percent_Identity=33.8753387533875, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=34.1530054644809, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=34.1530054644809, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=32.9842931937173, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17552114, Length=370, Percent_Identity=32.972972972973, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17507881, Length=378, Percent_Identity=33.0687830687831, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17537549, Length=362, Percent_Identity=33.4254143646409, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17509811, Length=384, Percent_Identity=33.59375, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI71995718, Length=371, Percent_Identity=34.7708894878706, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17505370, Length=360, Percent_Identity=35.2777777777778, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=32.0113314447592, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI115532548, Length=426, Percent_Identity=31.924882629108, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI115532546, Length=394, Percent_Identity=33.248730964467, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=32.1243523316062, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=31.3390313390313, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=31.9034852546917, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI71990816, Length=377, Percent_Identity=32.0954907161804, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=31.413612565445, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI25148203, Length=440, Percent_Identity=26.5909090909091, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=30.9090909090909, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=30.9090909090909, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=30.8483290488432, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17556951, Length=421, Percent_Identity=30.8788598574822, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=27.1767810026385, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=27.887323943662, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25148205, Length=366, Percent_Identity=25.1366120218579, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71997889, Length=393, Percent_Identity=25.9541984732824, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17565430, Length=380, Percent_Identity=26.5789473684211, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=24.7761194029851, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71982862, Length=191, Percent_Identity=31.9371727748691, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=46.0674157303371, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=37.0056497175141, Blast_Score=244, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=365, Percent_Identity=34.7945205479452, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=368, Percent_Identity=36.1413043478261, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320041, Length=359, Percent_Identity=36.4902506963788, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6325138, Length=373, Percent_Identity=34.3163538873995, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6324778, Length=374, Percent_Identity=32.8877005347594, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6320173, Length=456, Percent_Identity=30.0438596491228, Blast_Score=206, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=362, Percent_Identity=37.0165745856354, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6321856, Length=430, Percent_Identity=32.7906976744186, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=32.2404371584699, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=355, Percent_Identity=35.4929577464789, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=355, Percent_Identity=35.4929577464789, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=384, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=32.4022346368715, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=367, Percent_Identity=33.5149863760218, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=416, Percent_Identity=30.7692307692308, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=434, Percent_Identity=32.7188940092166, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=29.5399515738499, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=466, Percent_Identity=28.9699570815451, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=30.7086614173228, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=369, Percent_Identity=33.6043360433604, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321111, Length=351, Percent_Identity=31.6239316239316, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=376, Percent_Identity=30.0531914893617, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6324366, Length=358, Percent_Identity=25.6983240223464, Blast_Score=112, Evalue=9e-26, Organism=Saccharomyces cerevisiae, GI6322876, Length=424, Percent_Identity=24.7641509433962, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=39.5225464190981, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=37.7717391304348, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=36.7231638418079, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=37.3219373219373, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=36.1413043478261, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24642151, Length=370, Percent_Identity=35.9459459459459, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24644479, Length=363, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI281361218, Length=363, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644481, Length=363, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644487, Length=363, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI45551833, Length=363, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644485, Length=363, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644483, Length=363, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=34.4444444444444, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24583281, Length=374, Percent_Identity=35.0267379679144, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24583279, Length=374, Percent_Identity=35.0267379679144, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=34.4444444444444, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=34.2465753424658, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI21355075, Length=377, Percent_Identity=33.42175066313, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI24584994, Length=388, Percent_Identity=32.7319587628866, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=32.972972972973, Blast_Score=201, Evalue=6e-52, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=32.9758713136729, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI28571808, Length=362, Percent_Identity=33.9779005524862, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI28571809, Length=362, Percent_Identity=33.9779005524862, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=33.4285714285714, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=33.4285714285714, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=33.4285714285714, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=35.6913183279743, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24642822, Length=368, Percent_Identity=31.7934782608696, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17136814, Length=383, Percent_Identity=32.3759791122715, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=29.5154185022026, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=31.4763231197772, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=33.4246575342466, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=31.4917127071823, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=31.4917127071823, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=31.4917127071823, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=31.4917127071823, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24643725, Length=380, Percent_Identity=31.3157894736842, Blast_Score=168, Evalue=6e-42, Organism=Drosophila melanogaster, GI21355559, Length=385, Percent_Identity=32.4675324675325, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=30.7901907356948, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI17136666, Length=398, Percent_Identity=28.894472361809, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI18859659, Length=411, Percent_Identity=27.7372262773723, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI28571338, Length=411, Percent_Identity=27.7372262773723, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24640164, Length=354, Percent_Identity=26.5536723163842, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=28.8690476190476, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49728; Mature: 49596
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHH PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV HHHHHEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEE VLIATDVAARGIDIPDVSHVFNFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLL EEEEECHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH GKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAQKKKDEKEKPRVKKRHR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHCHHHHHHHC DTKNIGKRRKPSAAGTPSASSDE CHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHH PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV HHHHHEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEE VLIATDVAARGIDIPDVSHVFNFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLL EEEEECHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH GKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAQKKKDEKEKPRVKKRHR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHCHHHHHHHC DTKNIGKRRKPSAAGTPSASSDE CHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2461520; 9278503 [H]