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The map label for this gene is ytfH [H]

Identifier: 238892691

GI number: 238892691

Start: 476861

End: 477232

Strand: Direct

Name: ytfH [H]

Synonym: KP1_0482

Alternate gene names: 238892691

Gene position: 476861-477232 (Clockwise)

Preceding gene: 238892686

Following gene: 238892693

Centisome position: 9.09

GC content: 62.1

Gene sequence:

>372_bases
ATGGCCGAACCGACGCTGAGCGAGAAACTGCGCACCGGCAATTTGTTTGCGGAACAGTGCCCGTCGCGCGATGTGCTTAA
ACATGTCACCAGCCGCTGGGGCGTGTTGATTCTGGTGGCGCTGCGCGAGGGAACCCACCGTTTCAGCGATCTGCGCCGTA
AGATGGGCGGGGTCAGCGAAAAGATGCTGGCGCAGTCGCTGCAGGCGCTGGAGCAGGATGGTTTTATCGACCGCGTCTCT
TATCCGGTGGTGCCCCCGCACGTTGAATATAGCCTGACGCCGCTCGGCCTGCAGGTGAGCGAGAAGGTGGCCGCCCTGGC
GGACTGGATCGAGGTTAATCTGCCCTCGGTGCTGGCTAACCAAGGGGAGTGA

Upstream 100 bases:

>100_bases
AGAGCGATCATGGGTCTTCTCCTTCGTGTTTATTGGCAGTTGTGGTAAGCTACCACCTTAACTAACTTTTAGTAAGTACG
TACAAAAAGGTAAGTGTGAA

Downstream 100 bases:

>100_bases
AAATGTATCACTCCCTGTAGCCCCGGTAAGCGCAGCGCCACCGGGGAACAGGCATTACTTGCTCAAATCCAGCTGATAAA
TGGCGAAGCCGATATCATCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAEPTLSEKLRTGNLFAEQCPSRDVLKHVTSRWGVLILVALREGTHRFSDLRRKMGGVSEKMLAQSLQALEQDGFIDRVS
YPVVPPHVEYSLTPLGLQVSEKVAALADWIEVNLPSVLANQGE

Sequences:

>Translated_123_residues
MAEPTLSEKLRTGNLFAEQCPSRDVLKHVTSRWGVLILVALREGTHRFSDLRRKMGGVSEKMLAQSLQALEQDGFIDRVS
YPVVPPHVEYSLTPLGLQVSEKVAALADWIEVNLPSVLANQGE
>Mature_122_residues
AEPTLSEKLRTGNLFAEQCPSRDVLKHVTSRWGVLILVALREGTHRFSDLRRKMGGVSEKMLAQSLQALEQDGFIDRVSY
PVVPPHVEYSLTPLGLQVSEKVAALADWIEVNLPSVLANQGE

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=123, Percent_Identity=83.739837398374, Blast_Score=218, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13639; Mature: 13508

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPTLSEKLRTGNLFAEQCPSRDVLKHVTSRWGVLILVALREGTHRFSDLRRKMGGVSE
CCCCCHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH
KMLAQSLQALEQDGFIDRVSYPVVPPHVEYSLTPLGLQVSEKVAALADWIEVNLPSVLAN
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCC
QGE
CCC
>Mature Secondary Structure 
AEPTLSEKLRTGNLFAEQCPSRDVLKHVTSRWGVLILVALREGTHRFSDLRRKMGGVSE
CCCCHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH
KMLAQSLQALEQDGFIDRVSYPVVPPHVEYSLTPLGLQVSEKVAALADWIEVNLPSVLAN
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCC
QGE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]