Click here to switch to the map view.

The map label for this gene is pstA [H]

Identifier: 238892495

GI number: 238892495

Start: 278239

End: 279168

Strand: Reverse

Name: pstA [H]

Synonym: KP1_0262

Alternate gene names: 238892495

Gene position: 279168-278239 (Counterclockwise)

Preceding gene: 238892496

Following gene: 238892494

Centisome position: 5.32

GC content: 61.29

Gene sequence:

>930_bases
ATGCTCGCAACTCTGACGCGGCTGTTCCCGTTATGGGCACTGCTGCTCTCCGTTCTGGCCTATTACACTCCCACTACCTT
CACCCCAATTGGCCCATGGGTCACCACCCTGCTGATGCTGATCATGTTCGGTATGGGCGTGCATCTGAAGCTGGAGGATT
TCAAACGCGTCCTGTCGCGCCCGGCGCCGGTCGCTGCGGGGATCTTTCTCCATTATCTGGTGATGCCGCTCGCCGCCTGG
CTGCTGGCGCTGCTGTTTCATATGCCGCCGGAGCTTTCCGCCGGGATGGTGCTGGTCGGCAGCGTCGCCAGCGGGACCGC
CTCCAACGTGATGATCTTTCTTGCCAAAGGGGATGTGGCGCTGTCGGTGACCATCTCCTCGGTCTCCACCCTCGTCGGCG
TCGTGGCGACACCGCTGCTCACCCGTCTGTACGTCGACGCGCATATTCAGGTCGACGTCATGGGCATGTTGCTCAGCATT
CTGCAGATTGTGGTCATTCCTATCGCGCTGGGACTGATTGTCCATCATCTGCTGCCGAAGGTGGTGAAAGCGGTAGAGCC
GTTCCTGCCCGCCTTCTCGATGGTGTGCATTCTGGCGATCATCAGCGCGGTGGTGGCGGGTTCCGCCGCCCATATCGCCT
CCGTCGGCCTGGTGGTGATTATCGCGGTGATCCTGCATAACACTATTGGTCTGCTTGGCGGGTACTGGGGCGGACGTCTG
TTTGGTTTTGATGAATCCACCTGCCGTACGCTGGCGATCGAGGTGGGGATGCAGAACTCCGGCCTGGCGGCCGCGCTGGG
TAAAATTTACTTCGGCCCGCTGGCGGCGCTGCCGGGCGCGCTGTTCTCCGTCTGGCATAACCTGTCCGGTTCGCTGCTGG
CCGGGTACTGGTCAGGAAAGCCCATCGCCAAAAAAGCCGACAAGCGCTGA

Upstream 100 bases:

>100_bases
CGAACCCGGCTTTTTTATAACAACATCAACACAACCAGCTGACCTGCTCGCCGCCCATCGGGATGGCGCGGCCCGGTTCG
CGTATCGCAAGGAACACAAC

Downstream 100 bases:

>100_bases
GTGTGATACGTCCGGGCGCAGGCCCGGGCGTGTGCCTGCTTTAGTTGCCATACAGGGTATCAGTAAAATATTCATTGCCG
TACACTGGGTGCTCTGGTCT

Product: putative Na+-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLATLTRLFPLWALLLSVLAYYTPTTFTPIGPWVTTLLMLIMFGMGVHLKLEDFKRVLSRPAPVAAGIFLHYLVMPLAAW
LLALLFHMPPELSAGMVLVGSVASGTASNVMIFLAKGDVALSVTISSVSTLVGVVATPLLTRLYVDAHIQVDVMGMLLSI
LQIVVIPIALGLIVHHLLPKVVKAVEPFLPAFSMVCILAIISAVVAGSAAHIASVGLVVIIAVILHNTIGLLGGYWGGRL
FGFDESTCRTLAIEVGMQNSGLAAALGKIYFGPLAALPGALFSVWHNLSGSLLAGYWSGKPIAKKADKR

Sequences:

>Translated_309_residues
MLATLTRLFPLWALLLSVLAYYTPTTFTPIGPWVTTLLMLIMFGMGVHLKLEDFKRVLSRPAPVAAGIFLHYLVMPLAAW
LLALLFHMPPELSAGMVLVGSVASGTASNVMIFLAKGDVALSVTISSVSTLVGVVATPLLTRLYVDAHIQVDVMGMLLSI
LQIVVIPIALGLIVHHLLPKVVKAVEPFLPAFSMVCILAIISAVVAGSAAHIASVGLVVIIAVILHNTIGLLGGYWGGRL
FGFDESTCRTLAIEVGMQNSGLAAALGKIYFGPLAALPGALFSVWHNLSGSLLAGYWSGKPIAKKADKR
>Mature_309_residues
MLATLTRLFPLWALLLSVLAYYTPTTFTPIGPWVTTLLMLIMFGMGVHLKLEDFKRVLSRPAPVAAGIFLHYLVMPLAAW
LLALLFHMPPELSAGMVLVGSVASGTASNVMIFLAKGDVALSVTISSVSTLVGVVATPLLTRLYVDAHIQVDVMGMLLSI
LQIVVIPIALGLIVHHLLPKVVKAVEPFLPAFSMVCILAIISAVVAGSAAHIASVGLVVIIAVILHNTIGLLGGYWGGRL
FGFDESTCRTLAIEVGMQNSGLAAALGKIYFGPLAALPGALFSVWHNLSGSLLAGYWSGKPIAKKADKR

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:bile acid symporter family [H]

Homologues:

Organism=Homo sapiens, GI4506973, Length=252, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI4506971, Length=286, Percent_Identity=26.2237762237762, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI215422368, Length=235, Percent_Identity=29.7872340425532, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI215422370, Length=225, Percent_Identity=30.2222222222222, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI9790143, Length=225, Percent_Identity=30.2222222222222, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI58219066, Length=239, Percent_Identity=25.5230125523013, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI37537552, Length=251, Percent_Identity=26.2948207171315, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004710
- InterPro:   IPR002657 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 32699; Mature: 32699

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATLTRLFPLWALLLSVLAYYTPTTFTPIGPWVTTLLMLIMFGMGVHLKLEDFKRVLSR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC
PAPVAAGIFLHYLVMPLAAWLLALLFHMPPELSAGMVLVGSVASGTASNVMIFLAKGDVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCEE
LSVTISSVSTLVGVVATPLLTRLYVDAHIQVDVMGMLLSILQIVVIPIALGLIVHHLLPK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVKAVEPFLPAFSMVCILAIISAVVAGSAAHIASVGLVVIIAVILHNTIGLLGGYWGGRL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
FGFDESTCRTLAIEVGMQNSGLAAALGKIYFGPLAALPGALFSVWHNLSGSLLAGYWSGK
ECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
PIAKKADKR
CCCCCCCCC
>Mature Secondary Structure
MLATLTRLFPLWALLLSVLAYYTPTTFTPIGPWVTTLLMLIMFGMGVHLKLEDFKRVLSR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC
PAPVAAGIFLHYLVMPLAAWLLALLFHMPPELSAGMVLVGSVASGTASNVMIFLAKGDVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCEE
LSVTISSVSTLVGVVATPLLTRLYVDAHIQVDVMGMLLSILQIVVIPIALGLIVHHLLPK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVKAVEPFLPAFSMVCILAIISAVVAGSAAHIASVGLVVIIAVILHNTIGLLGGYWGGRL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
FGFDESTCRTLAIEVGMQNSGLAAALGKIYFGPLAALPGALFSVWHNLSGSLLAGYWSGK
ECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
PIAKKADKR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]