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The map label for this gene is yjbD [H]

Identifier: 238892494

GI number: 238892494

Start: 277850

End: 278122

Strand: Reverse

Name: yjbD [H]

Synonym: KP1_0261

Alternate gene names: 238892494

Gene position: 278122-277850 (Counterclockwise)

Preceding gene: 238892495

Following gene: 238892492

Centisome position: 5.3

GC content: 54.95

Gene sequence:

>273_bases
ATGGCACTCCCCCGTATTACACAAAAAGAGATGACCGAGCGCGAACAGCGCGAATTGAAAACGCTGCTTGACCGCGCGCG
TATTGCGCATGGCCGCCCGCTGAGCAATGCGGAAACGAACAGCGTGAAAAAGGAATATATCGATAAGCTGATGGCGCAGC
GTGAAGCGGAAGCGAAGAAAGCCCGCCAGGTGAGAAAACAGCAGGCTTATAAAACGGATAAGGAAGCGACCTTTTCCTGG
TCGGCGAATACGCCGACCCGCGGCAGGCGTTAA

Upstream 100 bases:

>100_bases
CGCAGGCCCGGGCGTGTGCCTGCTTTAGTTGCCATACAGGGTATCAGTAAAATATTCATTGCCGTACACTGGGTGCTCTG
GTCTGACTGAGGGCACCACC

Downstream 100 bases:

>100_bases
CGCCCTTTCTTTTTACGTCCCGGCTGGGTGAAACGTTTCCCGTTACCAGCCGGGCGGCCCTTATCGTTGCTATTTTCCAT
CTTCACCACCGGGCGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MALPRITQKEMTEREQRELKTLLDRARIAHGRPLSNAETNSVKKEYIDKLMAQREAEAKKARQVRKQQAYKTDKEATFSW
SANTPTRGRR

Sequences:

>Translated_90_residues
MALPRITQKEMTEREQRELKTLLDRARIAHGRPLSNAETNSVKKEYIDKLMAQREAEAKKARQVRKQQAYKTDKEATFSW
SANTPTRGRR
>Mature_89_residues
ALPRITQKEMTEREQRELKTLLDRARIAHGRPLSNAETNSVKKEYIDKLMAQREAEAKKARQVRKQQAYKTDKEATFSWS
ANTPTRGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790454, Length=90, Percent_Identity=84.4444444444444, Blast_Score=158, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020317
- ProDom:   PD063639 [H]

Pfam domain/function: PF11656 ComReg_Spx [H]

EC number: NA

Molecular weight: Translated: 10544; Mature: 10413

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPRITQKEMTEREQRELKTLLDRARIAHGRPLSNAETNSVKKEYIDKLMAQREAEAKK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARQVRKQQAYKTDKEATFSWSANTPTRGRR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALPRITQKEMTEREQRELKTLLDRARIAHGRPLSNAETNSVKKEYIDKLMAQREAEAKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARQVRKQQAYKTDKEATFSWSANTPTRGRR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]