Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_012724 |
Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is hmuV [H]
Identifier: 238028359
GI number: 238028359
Start: 3199432
End: 3201300
Strand: Reverse
Name: hmuV [H]
Synonym: bglu_1g28200
Alternate gene names: 238028359
Gene position: 3201300-3199432 (Counterclockwise)
Preceding gene: 238028360
Following gene: 238028358
Centisome position: 81.95
GC content: 77.42
Gene sequence:
>1869_bases TTGCGCGGCGCCGCGATGACGCCCGGCCGGGCCGCGGCGATCTGGGCCGCGCTCGCGGTCGCGGCCGGGCTCGTGCTGGT CGCGTCGCTCGCGCTCGGCAGCGTGCCGATCACGCCGTGGCAGGCGCTGTGCGCGCTGTTCGCGCCGGGCCGCGATGCGC TCGCGGGCGAGATCGTCACCACGCTGCGCCTGCCGCGCGCACTGGCCGGCTTCGGCTGCGGCGCGCTGCTGGCGCTGGCC GGGGCGCTGCTGCAGGTGCTGCTGCGCAATCCGCTCGCCGAGCCCTACGTGCTCGGCGTGTCGGGCGGCGCGGCCGGCTT CGCGCTGGCGGCGATGATCGCGGGCGCCGCCTGGTGGCTCGTCGACGCGGCCTCGTTCGTCGGCGCGCTGCTGTCGACCG CGCTGGTGCTGGGCCTGACCTATCGGCCGCTGGTGCGCGGCGCGTGGCGCGCCGGCCCGGGGGACGCGCGCGATGCGTCG CCCAGGCTGCTGCTGACCGGCGTGGTGATCGCGGCCGGCTGGGGCGCGCTCGTCACGCTGATGCTGTCGATCGCGCCCGA CGATCGCCTGCGCGGCATCCTGTTCTGGCTCGCGGGCGACCTCGGCAGCGCGGCGCCGCCGTGGTTCGCGCTCGGTGCGC TGGCCTGCGCCGCGGCGGCCGCGCTGCCGGTCGCGCCACAACTGAACGTGCTGCTGCGCGGCGATACCGCGGCGGCCGCG CTCGGCGTGCCGGTCGCGCGGCTGCGGCTGCGGATCGTGCTGATCGCCTCGCTGGCCGCCGCCCGCCGCGCTCACCGCGG CGGGCACCATCGGTTTCGTCGGCCTGGTCGTGCGGCATGCCTTGCGGCTCGCGTTCGGCAACGACCAGCGCATGCTGCTG CCCGCCTCGCTGCTGGCGGGCGGCGCCGTCGTGATGGGCGCCGATCTGGTGGGGCGCACCGTGATCGCGCCGGCGCAGTT GCCGGTCGGTGCGATGACGGCGCTGCTCGGCGTACCGGTGTTCCTGTGGATGCTGCTGCGCCGGCCCGCGCCATGAGCGG CGGGGCGAACCGCGCCGCTGGCGCCGGCGGCTGGCGCGCCTGCGGGCTGCGGCTCGCGGCCGGCTCGCGCACGCTCGTCG AGGCCCTGTCGCTCGCGTTCGGCGCCGGCGAACTGTGGTGCATCGCCGGCCCGAACGGTGCCGGCAAGACCACCCTGATC TCGGTGCTGGCGGGGCTCGCCGAGCCGGCCGCGGGACACGTCGAAGCCGACGGCAGACCGCTCGCCGCATGGCGGCCCGA GTCGCTCGCGCGGCGCCGCGCGCTGATGGCGCAGACGCGCCACGACGCGTTCGCCGCGAGCGTGTTCGACACGGTGCTGG CGCATCGCTTTCCGCATCTGGGCGGCTGGGGCTGGGAGCGCGAGGCCGATCGCGCCGCCGCGCGCGAGGCGCTGGCCAGG CTCGATCTGGCGGCGCTCGCGCCGCGCAACGTGCTGACGCTGTCGGGCGGCGAGCGCCAGCGCGTCGCGCTGGCCGGCGT GCTGTGCCAGGGCGCGCCGCTGCTGCTGCTCGACGAGCCGCTCGCGCACCTGGACCTGCACCATCAGGCCGATTGCCTCG ACGCGCTCGCGCGCTGGTTGCAGGACGGTGCGCCGCGCAGCGTGATTTTCTCGTGCCACGATCTGAACCTCGCGCGCCGT TTCGCGACCCACGCGCTGCTGCTCGACGGCCGCGGCGGCGCGCTGGCCGGCCCCGCGCGCGAGGTGCTGACGGCCGAGGC CGCGAGCGCCGCGTTCGGCTACCCGCTGGTGCTGATCGAGCGCGACGGCCACGAGGCGCTGGTGCCGGCCTGGCCGGCGC AGCCGCAGCGGGGGCGCACGGCGCCATGA
Upstream 100 bases:
>100_bases CAACACGCCGCGCCGCGGCGCCTACGTCACGATCGGCTGGCGGCAGCCGTAGGGCGTCGATCATGCCGCGCGCGCCGCGC GCCGCATGCGGGGGGCGCGG
Downstream 100 bases:
>100_bases CGGCGGCCACGCCACCGACCCACTTACCGAGGCCGGCGCGATCCACGCGCGGGCCGCTATTCGAAACGAATCCGGCATGA ACGATACCTACCTGGTCCCG
Product: cobalamin/Fe3+-siderophores ABC transporter ATPase
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MRGAAMTPGRAAAIWAALAVAAGLVLVASLALGSVPITPWQALCALFAPGRDALAGEIVTTLRLPRALAGFGCGALLALA GALLQVLLRNPLAEPYVLGVSGGAAGFALAAMIAGAAWWLVDAASFVGALLSTALVLGLTYRPLVRGAWRAGPGDARDAS PRLLLTGVVIAAGWGALVTLMLSIAPDDRLRGILFWLAGDLGSAAPPWFALGALACAAAAALPVAPQLNVLLRGDTAAAA LGVPVARLRLRIVLIASLAAARRAHRGGHHRFRRPGRAACLAARVRQRPAHAAARLAAGGRRRRDGRRSGGAHRDRAGAV AGRCDDGAARRTGVPVDAAAPARAMSGGANRAAGAGGWRACGLRLAAGSRTLVEALSLAFGAGELWCIAGPNGAGKTTLI SVLAGLAEPAAGHVEADGRPLAAWRPESLARRRALMAQTRHDAFAASVFDTVLAHRFPHLGGWGWEREADRAAAREALAR LDLAALAPRNVLTLSGGERQRVALAGVLCQGAPLLLLDEPLAHLDLHHQADCLDALARWLQDGAPRSVIFSCHDLNLARR FATHALLLDGRGGALAGPAREVLTAEAASAAFGYPLVLIERDGHEALVPAWPAQPQRGRTAP
Sequences:
>Translated_622_residues MRGAAMTPGRAAAIWAALAVAAGLVLVASLALGSVPITPWQALCALFAPGRDALAGEIVTTLRLPRALAGFGCGALLALA GALLQVLLRNPLAEPYVLGVSGGAAGFALAAMIAGAAWWLVDAASFVGALLSTALVLGLTYRPLVRGAWRAGPGDARDAS PRLLLTGVVIAAGWGALVTLMLSIAPDDRLRGILFWLAGDLGSAAPPWFALGALACAAAAALPVAPQLNVLLRGDTAAAA LGVPVARLRLRIVLIASLAAARRAHRGGHHRFRRPGRAACLAARVRQRPAHAAARLAAGGRRRRDGRRSGGAHRDRAGAV AGRCDDGAARRTGVPVDAAAPARAMSGGANRAAGAGGWRACGLRLAAGSRTLVEALSLAFGAGELWCIAGPNGAGKTTLI SVLAGLAEPAAGHVEADGRPLAAWRPESLARRRALMAQTRHDAFAASVFDTVLAHRFPHLGGWGWEREADRAAAREALAR LDLAALAPRNVLTLSGGERQRVALAGVLCQGAPLLLLDEPLAHLDLHHQADCLDALARWLQDGAPRSVIFSCHDLNLARR FATHALLLDGRGGALAGPAREVLTAEAASAAFGYPLVLIERDGHEALVPAWPAQPQRGRTAP >Mature_622_residues MRGAAMTPGRAAAIWAALAVAAGLVLVASLALGSVPITPWQALCALFAPGRDALAGEIVTTLRLPRALAGFGCGALLALA GALLQVLLRNPLAEPYVLGVSGGAAGFALAAMIAGAAWWLVDAASFVGALLSTALVLGLTYRPLVRGAWRAGPGDARDAS PRLLLTGVVIAAGWGALVTLMLSIAPDDRLRGILFWLAGDLGSAAPPWFALGALACAAAAALPVAPQLNVLLRGDTAAAA LGVPVARLRLRIVLIASLAAARRAHRGGHHRFRRPGRAACLAARVRQRPAHAAARLAAGGRRRRDGRRSGGAHRDRAGAV AGRCDDGAARRTGVPVDAAAPARAMSGGANRAAGAGGWRACGLRLAAGSRTLVEALSLAFGAGELWCIAGPNGAGKTTLI SVLAGLAEPAAGHVEADGRPLAAWRPESLARRRALMAQTRHDAFAASVFDTVLAHRFPHLGGWGWEREADRAAAREALAR LDLAALAPRNVLTLSGGERQRVALAGVLCQGAPLLLLDEPLAHLDLHHQADCLDALARWLQDGAPRSVIFSCHDLNLARR FATHALLLDGRGGALAGPAREVLTAEAASAAFGYPLVLIERDGHEALVPAWPAQPQRGRTAP
Specific function: Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system [H]
COG id: COG1120
COG function: function code PH; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=212, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI30795238, Length=212, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI215820660, Length=200, Percent_Identity=30, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI20143975, Length=200, Percent_Identity=30, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=27.8846153846154, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI9665248, Length=219, Percent_Identity=26.9406392694064, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1786803, Length=267, Percent_Identity=35.5805243445693, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1786345, Length=252, Percent_Identity=34.1269841269841, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1790739, Length=235, Percent_Identity=31.4893617021277, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1788002, Length=234, Percent_Identity=35.4700854700855, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI87081709, Length=212, Percent_Identity=30.6603773584906, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1788225, Length=212, Percent_Identity=30.6603773584906, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1786698, Length=192, Percent_Identity=29.1666666666667, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1789032, Length=212, Percent_Identity=31.6037735849057, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1788761, Length=222, Percent_Identity=31.0810810810811, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1787712, Length=185, Percent_Identity=31.8918918918919, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1789891, Length=204, Percent_Identity=32.3529411764706, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1786253, Length=219, Percent_Identity=31.9634703196347, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=31.8627450980392, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1787029, Length=214, Percent_Identity=28.0373831775701, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1786563, Length=213, Percent_Identity=30.9859154929577, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790544, Length=208, Percent_Identity=29.8076923076923, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081791, Length=180, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1787143, Length=161, Percent_Identity=29.8136645962733, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1786872, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789873, Length=206, Percent_Identity=28.1553398058252, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787105, Length=193, Percent_Identity=30.0518134715026, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788506, Length=233, Percent_Identity=30.4721030042918, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788004, Length=200, Percent_Identity=32.5, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786319, Length=217, Percent_Identity=26.7281105990783, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=212, Percent_Identity=29.7169811320755, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786653, Length=187, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788540, Length=222, Percent_Identity=30.6306306306306, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788450, Length=206, Percent_Identity=28.1553398058252, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786703, Length=200, Percent_Identity=30.5, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789751, Length=206, Percent_Identity=30.0970873786408, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI115533592, Length=224, Percent_Identity=29.9107142857143, Blast_Score=76, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR015863 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 63965; Mature: 63965
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAAMTPGRAAAIWAALAVAAGLVLVASLALGSVPITPWQALCALFAPGRDALAGEIVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH TLRLPRALAGFGCGALLALAGALLQVLLRNPLAEPYVLGVSGGAAGFALAAMIAGAAWWL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH VDAASFVGALLSTALVLGLTYRPLVRGAWRAGPGDARDASPRLLLTGVVIAAGWGALVTL HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH MLSIAPDDRLRGILFWLAGDLGSAAPPWFALGALACAAAAALPVAPQLNVLLRGDTAAAA HHHCCCCHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH LGVPVARLRLRIVLIASLAAARRAHRGGHHRFRRPGRAACLAARVRQRPAHAAARLAAGG HCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCC RRRRDGRRSGGAHRDRAGAVAGRCDDGAARRTGVPVDAAAPARAMSGGANRAAGAGGWRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHH CGLRLAAGSRTLVEALSLAFGAGELWCIAGPNGAGKTTLISVLAGLAEPAAGHVEADGRP HCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC LAAWRPESLARRRALMAQTRHDAFAASVFDTVLAHRFPHLGGWGWEREADRAAAREALAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LDLAALAPRNVLTLSGGERQRVALAGVLCQGAPLLLLDEPLAHLDLHHQADCLDALARWL HHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCHHHHHHHHHHHHHH QDGAPRSVIFSCHDLNLARRFATHALLLDGRGGALAGPAREVLTAEAASAAFGYPLVLIE HCCCCCEEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE RDGHEALVPAWPAQPQRGRTAP CCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure MRGAAMTPGRAAAIWAALAVAAGLVLVASLALGSVPITPWQALCALFAPGRDALAGEIVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH TLRLPRALAGFGCGALLALAGALLQVLLRNPLAEPYVLGVSGGAAGFALAAMIAGAAWWL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH VDAASFVGALLSTALVLGLTYRPLVRGAWRAGPGDARDASPRLLLTGVVIAAGWGALVTL HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH MLSIAPDDRLRGILFWLAGDLGSAAPPWFALGALACAAAAALPVAPQLNVLLRGDTAAAA HHHCCCCHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH LGVPVARLRLRIVLIASLAAARRAHRGGHHRFRRPGRAACLAARVRQRPAHAAARLAAGG HCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCC RRRRDGRRSGGAHRDRAGAVAGRCDDGAARRTGVPVDAAAPARAMSGGANRAAGAGGWRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHH CGLRLAAGSRTLVEALSLAFGAGELWCIAGPNGAGKTTLISVLAGLAEPAAGHVEADGRP HCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC LAAWRPESLARRRALMAQTRHDAFAASVFDTVLAHRFPHLGGWGWEREADRAAAREALAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LDLAALAPRNVLTLSGGERQRVALAGVLCQGAPLLLLDEPLAHLDLHHQADCLDALARWL HHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCHHHHHHHHHHHHHH QDGAPRSVIFSCHDLNLARRFATHALLLDGRGGALAGPAREVLTAEAASAAFGYPLVLIE HCCCCCEEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE RDGHEALVPAWPAQPQRGRTAP CCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA