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The map label for this gene is cobT [H]

Identifier: 238028358

GI number: 238028358

Start: 3198300

End: 3199355

Strand: Reverse

Name: cobT [H]

Synonym: bglu_1g28190

Alternate gene names: 238028358

Gene position: 3199355-3198300 (Counterclockwise)

Preceding gene: 238028359

Following gene: 238028357

Centisome position: 81.9

GC content: 75.0

Gene sequence:

>1056_bases
ATGAACGATACCTACCTGGTCCCGGCCGTCGACGCGCTCGACGACACGCTCACGGCGACGCTGCAGCGCCTGATCGATAC
CAAGACCAAGCCGCCCGGCAGCCTGGGCCGGCTCGAGGCGCTGGCGCTGCAGCTGGGCCGCATCCAGCGCAGCACCGCGC
CGCGCGTCGAGCGGCCCGTGACGATCGTGTTCGCGGCCGACCACGGCATCGCCGCCGAGGGCGTGAGCCCCTATCCGCAG
GCGGTGACCGCGCAGATGGTGGCGAACTTCCTGGCCGGCGGCGCGGCGATCAACGCGTTTTCGAAGGTGGCCGGCTGCGA
GCTGGAGATCGTCGACGCGGGCGTGGCCACGCCGCTACCGGCGTCGCCCGCGCTGGTGTCGGTGCCGGTCGCTCCCGGCA
CGCGCAACTTCGCGCGCGAACGCGCGATGAGCGACGCGCAGTTGCATGCGGCGCTCGCGGCCGGCGCGGCGCGCGTGGCG
CACCATGCGGCGCTCGGGACCAACGTGCTGGGCTGCGGCGAGATGGGTATCGCCAACACCTCGTCGGCGGCCTGCCTGAT
GAGCCGCTTCACGGGCCTGCCGCTTGCCGAGTGCGTGGGGCGCGGCACCGGCCTCGACGATCGCGGGCTGGCGCACAAGC
GCGCGGTGCTGGAGGCGGCGCTCGCGCGGCACGCCGACGCGCAGGCGCCGCTGGCGGTGCTGGCCGCGTTCGGCGGCTTC
GAAATCGCGATGATGACGGGCGCGTTTCTCGCGGCCGCGCGGCTGCGCATGGCGATCGTGGTGGACGGCTTCATCGCCAG
CGCGGCGCTGCTGGCCGCCGTGGCGCTCGCGCCGGCCGTGCGCGACTACTGCGTGTTCTCGCACGTCTCGGACGAGGCCG
GCCACCGCCGCATGCTCGACCACCTCGGCGCCGCGCCGCTGCTCGCGCTGGACCTGCGGCTCGGCGAGGGCACGGGCGCC
GCGCTCGCGCTGCCGCTGCTGCGCGCGGCGGCCGCGTTCGTCAACGAGATGGCCAGCTTCGAGGCCGCCGGCGTCGCGAA
CCGCGGCGACGCGTAG

Upstream 100 bases:

>100_bases
CAGCGGGGGCGCACGGCGCCATGACGGCGGCCACGCCACCGACCCACTTACCGAGGCCGGCGCGATCCACGCGCGGGCCG
CTATTCGAAACGAATCCGGC

Downstream 100 bases:

>100_bases
GCGGGGGCACGCGATGCGCTGGTCCGCCGAATTGCGCTATTTCTTCGTCGCGCTCGGCTATTTCACGCGCGTGCCGATCC
CGCGGCGGATCGGCTACGCG

Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Products: NA

Alternate protein names: NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNDTYLVPAVDALDDTLTATLQRLIDTKTKPPGSLGRLEALALQLGRIQRSTAPRVERPVTIVFAADHGIAAEGVSPYPQ
AVTAQMVANFLAGGAAINAFSKVAGCELEIVDAGVATPLPASPALVSVPVAPGTRNFARERAMSDAQLHAALAAGAARVA
HHAALGTNVLGCGEMGIANTSSAACLMSRFTGLPLAECVGRGTGLDDRGLAHKRAVLEAALARHADAQAPLAVLAAFGGF
EIAMMTGAFLAAARLRMAIVVDGFIASAALLAAVALAPAVRDYCVFSHVSDEAGHRRMLDHLGAAPLLALDLRLGEGTGA
ALALPLLRAAAAFVNEMASFEAAGVANRGDA

Sequences:

>Translated_351_residues
MNDTYLVPAVDALDDTLTATLQRLIDTKTKPPGSLGRLEALALQLGRIQRSTAPRVERPVTIVFAADHGIAAEGVSPYPQ
AVTAQMVANFLAGGAAINAFSKVAGCELEIVDAGVATPLPASPALVSVPVAPGTRNFARERAMSDAQLHAALAAGAARVA
HHAALGTNVLGCGEMGIANTSSAACLMSRFTGLPLAECVGRGTGLDDRGLAHKRAVLEAALARHADAQAPLAVLAAFGGF
EIAMMTGAFLAAARLRMAIVVDGFIASAALLAAVALAPAVRDYCVFSHVSDEAGHRRMLDHLGAAPLLALDLRLGEGTGA
ALALPLLRAAAAFVNEMASFEAAGVANRGDA
>Mature_351_residues
MNDTYLVPAVDALDDTLTATLQRLIDTKTKPPGSLGRLEALALQLGRIQRSTAPRVERPVTIVFAADHGIAAEGVSPYPQ
AVTAQMVANFLAGGAAINAFSKVAGCELEIVDAGVATPLPASPALVSVPVAPGTRNFARERAMSDAQLHAALAAGAARVA
HHAALGTNVLGCGEMGIANTSSAACLMSRFTGLPLAECVGRGTGLDDRGLAHKRAVLEAALARHADAQAPLAVLAAFGGF
EIAMMTGAFLAAARLRMAIVVDGFIASAALLAAVALAPAVRDYCVFSHVSDEAGHRRMLDHLGAAPLLALDLRLGEGTGA
ALALPLLRAAAAFVNEMASFEAAGVANRGDA

Specific function: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) [H]

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobT family [H]

Homologues:

Organism=Escherichia coli, GI1788300, Length=347, Percent_Identity=37.7521613832853, Blast_Score=207, Evalue=6e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003200
- InterPro:   IPR023195
- InterPro:   IPR017846 [H]

Pfam domain/function: PF02277 DBI_PRT [H]

EC number: =2.4.2.21 [H]

Molecular weight: Translated: 35733; Mature: 35733

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTYLVPAVDALDDTLTATLQRLIDTKTKPPGSLGRLEALALQLGRIQRSTAPRVERPV
CCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
TIVFAADHGIAAEGVSPYPQAVTAQMVANFLAGGAAINAFSKVAGCELEIVDAGVATPLP
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCC
ASPALVSVPVAPGTRNFARERAMSDAQLHAALAAGAARVAHHAALGTNVLGCGEMGIANT
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSAACLMSRFTGLPLAECVGRGTGLDDRGLAHKRAVLEAALARHADAQAPLAVLAAFGGF
CHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH
EIAMMTGAFLAAARLRMAIVVDGFIASAALLAAVALAPAVRDYCVFSHVSDEAGHRRMLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
HLGAAPLLALDLRLGEGTGAALALPLLRAAAAFVNEMASFEAAGVANRGDA
HCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNDTYLVPAVDALDDTLTATLQRLIDTKTKPPGSLGRLEALALQLGRIQRSTAPRVERPV
CCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
TIVFAADHGIAAEGVSPYPQAVTAQMVANFLAGGAAINAFSKVAGCELEIVDAGVATPLP
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCC
ASPALVSVPVAPGTRNFARERAMSDAQLHAALAAGAARVAHHAALGTNVLGCGEMGIANT
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSAACLMSRFTGLPLAECVGRGTGLDDRGLAHKRAVLEAALARHADAQAPLAVLAAFGGF
CHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH
EIAMMTGAFLAAARLRMAIVVDGFIASAALLAAVALAPAVRDYCVFSHVSDEAGHRRMLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
HLGAAPLLALDLRLGEGTGAALALPLLRAAAAFVNEMASFEAAGVANRGDA
HCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA