Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is hisQ [H]
Identifier: 238028317
GI number: 238028317
Start: 3147392
End: 3148081
Strand: Direct
Name: hisQ [H]
Synonym: bglu_1g27780
Alternate gene names: 238028317
Gene position: 3147392-3148081 (Clockwise)
Preceding gene: 238028316
Following gene: 238028318
Centisome position: 80.57
GC content: 64.06
Gene sequence:
>690_bases ATGTTTCTTCAAGGCTACGGCCCGCTGATACTTTCCGGCACCTGGCAGACCATCAAGCTCGCCGTGCTGTCGCTCGCCTT CGCGTTCGTGCTCGGCCTGCTCGGCGCGGCCGCGAAACTCTCGCGCAACCGGATCACGAACGGGCTCGGCACGCTCTACA CCACGCTGATCCGCGGCGTGCCCGATCTGGTGCTGATGCTGCTGCTGTTCTACAGCCTGCAGATCTGGCTCAACCAATTC ACCGACATGATGAACTGGGATCAGATCGACATCGACCCGTTCGCGGCCGGCGTGCTGGTGCTCGGCTTCATCTACGGCGC CTACTTCACCGAAACCTTCCGCGGCGCGTTCCTGTCGGTGCCGCGCGGCCAGCTCGAGGCGGGCGCCGCCTACGGGATGT CGAACTGGCGGGTGTTCTCGCGCGTGATGTTCCCGCAGATGATGCGCTTCGCGCTGCCCGGCATCGGCAACAACTGGCAG GTGCTCGTCAAGTCCACCGCGCTGGTGTCGATCATCGGCCTGGCCGACGTGGTCAAGGCCTCGCAGGACGCCGGCAAGGG CACGCTGCGTTTCTTCTTCTTCACGCTGCTCGCGGGGGCCATCTACCTCGCGATCACGACGATCTCGAACTTCGTGCTGA TGTGGCTGGAAAAGCGCTACTCCACGGGCGTCCGCAAGGCTGACCTATGA
Upstream 100 bases:
>100_bases CGGAATCACCGGGCAGCCCGACCCACATGCACGGGGCGTGCCGCCCGACCCGCGGCACGCGTCTTTCTCGGCGCCCGCGT TGCGCCGTCAAGGACTTCAT
Downstream 100 bases:
>100_bases TCGAACTGATTCAGGAATACTGGCGCAACTACCTCTACACCGACGGCTATCACATCACCGGCGTGGCGATCACCCTGTGG CTGCTGGTGGTGTCGATCGG
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MFLQGYGPLILSGTWQTIKLAVLSLAFAFVLGLLGAAAKLSRNRITNGLGTLYTTLIRGVPDLVLMLLLFYSLQIWLNQF TDMMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSNWRVFSRVMFPQMMRFALPGIGNNWQ VLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL
Sequences:
>Translated_229_residues MFLQGYGPLILSGTWQTIKLAVLSLAFAFVLGLLGAAAKLSRNRITNGLGTLYTTLIRGVPDLVLMLLLFYSLQIWLNQF TDMMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSNWRVFSRVMFPQMMRFALPGIGNNWQ VLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL >Mature_229_residues MFLQGYGPLILSGTWQTIKLAVLSLAFAFVLGLLGAAAKLSRNRITNGLGTLYTTLIRGVPDLVLMLLLFYSLQIWLNQF TDMMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSNWRVFSRVMFPQMMRFALPGIGNNWQ VLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=60.352422907489, Blast_Score=283, Evalue=7e-78, Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=34.2222222222222, Blast_Score=133, Evalue=9e-33, Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=33.4905660377358, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1788226, Length=221, Percent_Identity=28.9592760180996, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=30.4147465437788, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1786874, Length=181, Percent_Identity=32.5966850828729, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87082239, Length=214, Percent_Identity=27.1028037383178, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=25, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=26.2672811059908, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25354; Mature: 25354
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLQGYGPLILSGTWQTIKLAVLSLAFAFVLGLLGAAAKLSRNRITNGLGTLYTTLIRGV CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDLVLMLLLFYSLQIWLNQFTDMMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRGQLEAGAAYGMSNWRVFSRVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKA CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFLQGYGPLILSGTWQTIKLAVLSLAFAFVLGLLGAAAKLSRNRITNGLGTLYTTLIRGV CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDLVLMLLLFYSLQIWLNQFTDMMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRGQLEAGAAYGMSNWRVFSRVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKA CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]