Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is argT [H]
Identifier: 238028316
GI number: 238028316
Start: 3146435
End: 3147211
Strand: Direct
Name: argT [H]
Synonym: bglu_1g27770
Alternate gene names: 238028316
Gene position: 3146435-3147211 (Clockwise)
Preceding gene: 238028315
Following gene: 238028317
Centisome position: 80.54
GC content: 66.02
Gene sequence:
>777_bases ATGAAGAAGCTCGCCCTGTGCGCAGCACTCGCCATGGCGGCGAGCGGCGCCGTCGCGAAGGAATGGAAGACGGTCCGGAT CGGCGTCGACGCCAGTTACCCGCCGTTCGAATCGGTCGCGCAGAACGGCGACATCGTCGGCTTCGACGTCGACCTGGCGA AGGAAATCTGCACGCGCATCGCGGTGCGCTGCACCTGGGTCGCGCAGGATCTCGACGGGATCATCCCGGCCCTGAAGGCG CGCAAGTTCGACGTGATCATGTCGTCGCTGACCGTCACCGACAAGCGCCGCGAGCAGATCGACTTCTCGGACAAGCTGTA CGACGCGCCCGCGCGGATGATCGCGCCGGCCGGCTCGCCGCTGCTGCCCACGCTCGCCTCGCTCAAGGGCAAGCGCGTCG GGGTCGAGCAGGGGTCGACGCAGGAAACCTACGCGAAGACCTACTGGGAGCCGCGCGGTGTGACGATCGTGCCGTACCAA AACCAGGATCAGGTCTACGCCGATCTCGGGACCGGCCGGCTCGACGCCGCGCTGCAGGACGAATTGCAGGCCGACTACGG GTTCCTGCGCACGCCGCGCGGCAAGGGTTTCGCGTGGGCGGGCCCGGAAGTGAAGGACCCGAAGACGATCGGCGACGGCA CCGCGATCGGCCTGCGCAAGGAGGACACGGATCTGAAGGCGAAGATCAACGCCGCTCTCGCCGCGATGCACAAGGATGGG ACTTACGACAGGTTGTCGCACAAGTACTTCTCGTTCAGCGTGTATTCGGCGAAGTAA
Upstream 100 bases:
>100_bases CCCGATCGCCGAAGCCGCCGACACCGAATTTTGACTGACTAGAATACGGCCGGCGCGGCGCGGGCGAAGGCCGGCGCGCG GCAGTCGTAAGAGGAATCAG
Downstream 100 bases:
>100_bases CCACGTTTCGGCCGGACTGGCCGCCGCGCGTCACCGCGCGCGGCGGCCAGTCCGGCACGAGGAAGTCGCCAGCCGCCCGG CGGAATCACCGGGCAGCCCG
Product: Cationic amino acid ABC transporter periplasmic binding protein
Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: LAO-binding protein [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKKLALCAALAMAASGAVAKEWKTVRIGVDASYPPFESVAQNGDIVGFDVDLAKEICTRIAVRCTWVAQDLDGIIPALKA RKFDVIMSSLTVTDKRREQIDFSDKLYDAPARMIAPAGSPLLPTLASLKGKRVGVEQGSTQETYAKTYWEPRGVTIVPYQ NQDQVYADLGTGRLDAALQDELQADYGFLRTPRGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAMHKDG TYDRLSHKYFSFSVYSAK
Sequences:
>Translated_258_residues MKKLALCAALAMAASGAVAKEWKTVRIGVDASYPPFESVAQNGDIVGFDVDLAKEICTRIAVRCTWVAQDLDGIIPALKA RKFDVIMSSLTVTDKRREQIDFSDKLYDAPARMIAPAGSPLLPTLASLKGKRVGVEQGSTQETYAKTYWEPRGVTIVPYQ NQDQVYADLGTGRLDAALQDELQADYGFLRTPRGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAMHKDG TYDRLSHKYFSFSVYSAK >Mature_258_residues MKKLALCAALAMAASGAVAKEWKTVRIGVDASYPPFESVAQNGDIVGFDVDLAKEICTRIAVRCTWVAQDLDGIIPALKA RKFDVIMSSLTVTDKRREQIDFSDKLYDAPARMIAPAGSPLLPTLASLKGKRVGVEQGSTQETYAKTYWEPRGVTIVPYQ NQDQVYADLGTGRLDAALQDELQADYGFLRTPRGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAMHKDG TYDRLSHKYFSFSVYSAK
Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788649, Length=259, Percent_Identity=57.5289575289575, Blast_Score=303, Evalue=1e-83, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=54.0772532188841, Blast_Score=281, Evalue=3e-77, Organism=Escherichia coli, GI1787085, Length=251, Percent_Identity=38.2470119521912, Blast_Score=173, Evalue=9e-45, Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=36, Blast_Score=160, Evalue=9e-41, Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=31.7269076305221, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1788228, Length=239, Percent_Identity=30.1255230125523, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28142; Mature: 28142
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLALCAALAMAASGAVAKEWKTVRIGVDASYPPFESVAQNGDIVGFDVDLAKEICTRI CCHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCHHHHHCCCCEEEECHHHHHHHHHHH AVRCTWVAQDLDGIIPALKARKFDVIMSSLTVTDKRREQIDFSDKLYDAPARMIAPAGSP HHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHCCCHHHCCCCCCC LLPTLASLKGKRVGVEQGSTQETYAKTYWEPRGVTIVPYQNQDQVYADLGTGRLDAALQD HHHHHHHCCCCEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHH ELQADYGFLRTPRGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAMHKDG HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC TYDRLSHKYFSFSVYSAK CHHHHCCEEEEEEEEECC >Mature Secondary Structure MKKLALCAALAMAASGAVAKEWKTVRIGVDASYPPFESVAQNGDIVGFDVDLAKEICTRI CCHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCHHHHHCCCCEEEECHHHHHHHHHHH AVRCTWVAQDLDGIIPALKARKFDVIMSSLTVTDKRREQIDFSDKLYDAPARMIAPAGSP HHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHCCCHHHCCCCCCC LLPTLASLKGKRVGVEQGSTQETYAKTYWEPRGVTIVPYQNQDQVYADLGTGRLDAALQD HHHHHHHCCCCEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHH ELQADYGFLRTPRGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAMHKDG HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC TYDRLSHKYFSFSVYSAK CHHHHCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3040734; 9298646 [H]