Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is hisM [H]
Identifier: 238028318
GI number: 238028318
Start: 3148078
End: 3148791
Strand: Direct
Name: hisM [H]
Synonym: bglu_1g27790
Alternate gene names: 238028318
Gene position: 3148078-3148791 (Clockwise)
Preceding gene: 238028317
Following gene: 238028319
Centisome position: 80.59
GC content: 65.83
Gene sequence:
>714_bases ATGATCGAACTGATTCAGGAATACTGGCGCAACTACCTCTACACCGACGGCTATCACATCACCGGCGTGGCGATCACCCT GTGGCTGCTGGTGGTGTCGATCGGCCTCGGCTTCTGCCTGTCGGTGCCGCTCGCTTGCGCGCGCGTGTCGAAGCGCAAGT GGCTGGCCGGCGCGGTGTGGCTCTATACCTACGTGTTCCGCGGCACGCCGCTCTACGTGCAGCTGCTGCTCTGCTACACG GGCCTCTACAGCCTGCAGGCGGTGCGCGGCACGCCGCTGTTGAACGAGTTCTTCCGCGACGGCATGCACTGCACGCTGCT CGCGTTCACGCTCAACACCTGCGCCTACACCACCGAGATCTTCGCCGGCGCGATCAAGGCGACCGCCTACGGCGAGATCG AGGCCGCGCGCGCCTACGGGATGTCCACCTTCACGCTCTACCGCCGCGTGATCCTGCCCTCCGCGCTGCGCCGCGCGCTG CCGCTCTACAGCAACGAGGTGATCCTGATGCTGCACGCCACCACGGTGGCGTTCACGGCCACCGTGCCCGACATCCTGAA GATCGCGCGCGACGTCAACTCGGCCACCTACATGTCGTTCCACGCGTTCGGCATCGCCGCGCTCCTCTATCTCGCGATCT CGTTTACGCTCGTGTGGCTGTTCCGCCAGGCCGAGCGGCGCTGGCTCGCCTACCTGCGCCCGCAAGGCAAATAA
Upstream 100 bases:
>100_bases TGCTCGCGGGGGCCATCTACCTCGCGATCACGACGATCTCGAACTTCGTGCTGATGTGGCTGGAAAAGCGCTACTCCACG GGCGTCCGCAAGGCTGACCT
Downstream 100 bases:
>100_bases ACGGCGCGAGGACTCCTGATGAATTCCAAGATGCACAAGCTTTTCGTCGACGATCTCCACAAGCAGTACGGCAGCAACGA AGTCCTGAAGGGCGTGTCGC
Product: histidine/lysine/arginine/ornithine ABC transporter permease HisM
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIELIQEYWRNYLYTDGYHITGVAITLWLLVVSIGLGFCLSVPLACARVSKRKWLAGAVWLYTYVFRGTPLYVQLLLCYT GLYSLQAVRGTPLLNEFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATAYGEIEAARAYGMSTFTLYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRQAERRWLAYLRPQGK
Sequences:
>Translated_237_residues MIELIQEYWRNYLYTDGYHITGVAITLWLLVVSIGLGFCLSVPLACARVSKRKWLAGAVWLYTYVFRGTPLYVQLLLCYT GLYSLQAVRGTPLLNEFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATAYGEIEAARAYGMSTFTLYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRQAERRWLAYLRPQGK >Mature_237_residues MIELIQEYWRNYLYTDGYHITGVAITLWLLVVSIGLGFCLSVPLACARVSKRKWLAGAVWLYTYVFRGTPLYVQLLLCYT GLYSLQAVRGTPLLNEFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATAYGEIEAARAYGMSTFTLYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRQAERRWLAYLRPQGK
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788645, Length=236, Percent_Identity=65.2542372881356, Blast_Score=325, Evalue=1e-90, Organism=Escherichia coli, GI1787086, Length=178, Percent_Identity=35.9550561797753, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=33.0143540669856, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787030, Length=210, Percent_Identity=29.5238095238095, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788646, Length=215, Percent_Identity=27.906976744186, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=26.9058295964126, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48994930, Length=184, Percent_Identity=29.3478260869565, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787087, Length=124, Percent_Identity=26.6129032258064, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26848; Mature: 26848
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELIQEYWRNYLYTDGYHITGVAITLWLLVVSIGLGFCLSVPLACARVSKRKWLAGAVW CHHHHHHHHHHCEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPLLNEFFRDGMHCTLLAFTLNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAGAIKATAYGEIEAARAYGMSTFTLYRRVILPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRQAERRWLAYLRPQGK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIELIQEYWRNYLYTDGYHITGVAITLWLLVVSIGLGFCLSVPLACARVSKRKWLAGAVW CHHHHHHHHHHCEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPLLNEFFRDGMHCTLLAFTLNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAGAIKATAYGEIEAARAYGMSTFTLYRRVILPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRQAERRWLAYLRPQGK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]