Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028308
Identifier: 238028308
GI number: 238028308
Start: 3138119
End: 3138754
Strand: Direct
Name: 238028308
Synonym: bglu_1g27690
Alternate gene names: NA
Gene position: 3138119-3138754 (Clockwise)
Preceding gene: 238028304
Following gene: 238028309
Centisome position: 80.33
GC content: 74.21
Gene sequence:
>636_bases ATGAACTCACGCACCGCTTCGTTTCGGCGGCCGCCCCGCGCCGCGAGCCTCGCGCTCGCCGGCGCCGCGTTGTCGCTGCT GCTCTCCGGCTGCAATTCCCTCTATAGCGAAGGCGCGACCGCCGGCGCCGGCATCGCCGGCGCGGCGGTGGCCGCGAAGG TCACCAACAACGCGGCGGTGGCCACCGGCATCGGCCTCGGCGCGGTGGCCGCCGCGCGCGCCGGCGTGCAGTACACGCAG CGCGTCGCCCATACCTATTCGCAGGCCCAGATCGCCGACGCGGCCGGCCCGCTTCCGGTGGGCGGCGTGGCGCGCTGGTC CGCCCATCACACGGTGCCGATCGAGGACGACGAATACGGCCGCGTGACGGTCAGCCGCCTGATCAGCGTCGGGCCGCTCG ACTGCAAGGAAATCGTGTTCGCGGTGGACAGCGACGCGAAGCACGCGGCCGCGGCCAGCGCGGCCTCGGGTGCCGCCGCT CCGGCCGCCGCATCGGCGGCCTCGGCCGCGGCGGCCGCGACGCCGCCCGCGCAATTGGGCTCGTCGTTCTACGTCGCGAC TATCTGCCGCGACGGGCCGAAATGGAAATGGGCCTCGGCCGAACCGGCCACGGCGCGCTGGGGAGCACTGCAATGA
Upstream 100 bases:
>100_bases CCATTCTTTGCAATTCGGATCGAAACATTGCGGAACAATGACGCCGATGCCGCGCAAGCAGCCGCGGACGCGGCGCATTC CCGACAGGACCGCATCCAGC
Downstream 100 bases:
>100_bases GCGCGTGGCGCGGCGCGGCGGCCGTCTGCGCGCTCGCGGCGGCGGTGTCCACGCTGCCCGGCTGCGGCTCGGTGGGCGCG GCGAGCGGTGCGCTGGCCGG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNSRTASFRRPPRAASLALAGAALSLLLSGCNSLYSEGATAGAGIAGAAVAAKVTNNAAVATGIGLGAVAAARAGVQYTQ RVAHTYSQAQIADAAGPLPVGGVARWSAHHTVPIEDDEYGRVTVSRLISVGPLDCKEIVFAVDSDAKHAAAASAASGAAA PAAASAASAAAAATPPAQLGSSFYVATICRDGPKWKWASAEPATARWGALQ
Sequences:
>Translated_211_residues MNSRTASFRRPPRAASLALAGAALSLLLSGCNSLYSEGATAGAGIAGAAVAAKVTNNAAVATGIGLGAVAAARAGVQYTQ RVAHTYSQAQIADAAGPLPVGGVARWSAHHTVPIEDDEYGRVTVSRLISVGPLDCKEIVFAVDSDAKHAAAASAASGAAA PAAASAASAAAAATPPAQLGSSFYVATICRDGPKWKWASAEPATARWGALQ >Mature_211_residues MNSRTASFRRPPRAASLALAGAALSLLLSGCNSLYSEGATAGAGIAGAAVAAKVTNNAAVATGIGLGAVAAARAGVQYTQ RVAHTYSQAQIADAAGPLPVGGVARWSAHHTVPIEDDEYGRVTVSRLISVGPLDCKEIVFAVDSDAKHAAAASAASGAAA PAAASAASAAAAATPPAQLGSSFYVATICRDGPKWKWASAEPATARWGALQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20836; Mature: 20836
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRTASFRRPPRAASLALAGAALSLLLSGCNSLYSEGATAGAGIAGAAVAAKVTNNAAV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEE ATGIGLGAVAAARAGVQYTQRVAHTYSQAQIADAAGPLPVGGVARWSAHHTVPIEDDEYG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RVTVSRLISVGPLDCKEIVFAVDSDAKHAAAASAASGAAAPAAASAASAAAAATPPAQLG HHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHC SSFYVATICRDGPKWKWASAEPATARWGALQ CCEEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSRTASFRRPPRAASLALAGAALSLLLSGCNSLYSEGATAGAGIAGAAVAAKVTNNAAV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEE ATGIGLGAVAAARAGVQYTQRVAHTYSQAQIADAAGPLPVGGVARWSAHHTVPIEDDEYG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RVTVSRLISVGPLDCKEIVFAVDSDAKHAAAASAASGAAAPAAASAASAAAAATPPAQLG HHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHC SSFYVATICRDGPKWKWASAEPATARWGALQ CCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA