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The map label for this gene is ydcO [H]

Identifier: 238028223

GI number: 238028223

Start: 3046946

End: 3048157

Strand: Direct

Name: ydcO [H]

Synonym: bglu_1g26760

Alternate gene names: 238028223

Gene position: 3046946-3048157 (Clockwise)

Preceding gene: 238028221

Following gene: 238028224

Centisome position: 78.0

GC content: 70.3

Gene sequence:

>1212_bases
ATGAATTCGCCTCACGCACCAGCCACGCCGCGCGCCGCCTCTGCCTCGCGCTTCCTCGTGGACACCTCGGCGTCCACGCT
CGTCGCCGGTTTCGTCGCGATGATGACGGGCTATACCAGCGCGCTCGTGCTGATGTTCCAGGCCGGCCGCGCCGCGCACC
TGAGCGACGCGCAGATCTCGTCGTGGATCTGGGCCCTGTCGATCAGCATGGGCCTGACCACCGTCGGCCTGTCGCTGCGC
TACCGCGCGCCCATCGTCACCGCGTGGTCGACGCCGGGCGCCGCGCTGCTGATCGCCTCGCTGCCGGGCGTGCCATACCC
CTACGCGATCGGCGCGTTCGTGGTCTGCGCGCTGCTGCTGACGGCGGTGGGCGTGAGCGGCATGTTCGACGCGCTGATGA
AGCGGATTCCGGCCGGCATCGCCTCGGCGCTGCTGGCCGGCATCCTGTTCGAGATCGGCATCGAGATCTTCCATGCCGCG
CAGATCCGGCCCGCGCTCGTGATCACGATGTTCCTCACCTACCTGGTGGTCAAGCGCCTCGTGCCGCGCTACGCGATCAT
CGTCACGCTCGCCTCGGGCACGGCCGTTGCGGGCGCGCTCGGCCTGCTCGACTTCAGCCGCTTCCACGTCGCGCTCGCGC
ATCCCGTGCTGACCCTGCCGGCCTTCTCCGCCGCCTCGATCATCAGTATCGGGATTCCGCTGTTCATCGTCGCGATGGCC
TCGCAGAACGTGCCCGGCATCGCCGTGCTGCGCGCCGACGGTTACGCCACGCCGTCCTCACCGCTGCTTGCCGCCACCGG
CCTCGCCTCGCTCGTGTTCGCGCCGTTCGGCTCGCACGGCATCAATCTCGCGGCGATCACGGCGGCCATCTGCACCGGCG
GCGAGGCCCACGCCGAGCCTCGCCGCCGCTACACCGCCGCCGTCTGGTGCGGCGTGTTCTACCTGATCGCGGGCGTGTTC
GGCGCGACCATCGCCGCGCTGTTCGATGCGCTGCCGAAGGCGCTGGTGGTGTCGGTGGCCGCGCTCGCGCTGTTCGGCTC
GATCATGAGCGGGCTGGCCAACGCGATGCAGGAGGTCCGGCAACGCGAGGCGGCGCTCGTCACGTTCATGGTGACGGCCT
CGGGGCTGACGCTGCTGTCGATCGGCTCGGCGTTCTGGGGGCTCGTCGCCGGCATCGTCACCCATCTCATCCTGAACGCG
CGGCGCGCCTGA

Upstream 100 bases:

>100_bases
CACGCTTCCGGTTTTTTGCGCGCCGGCGCGCATTCTGCTACGCTCGCCGCGGCGCCCGCGCCGCGTGCTTGCCGTTCCTC
CTCCTTTGAGCCCTCGCCAG

Downstream 100 bases:

>100_bases
GGGGCCGGGCGCCGCGCCCGCGCCGCCGGCGCGGGGCTGGCCGCCGGGCGCCCGCCATTGCCGGGCTCGGCAGTCACGGA
CGGCTTGGTCAATCAAGCCT

Product: Benzoate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNSPHAPATPRAASASRFLVDTSASTLVAGFVAMMTGYTSALVLMFQAGRAAHLSDAQISSWIWALSISMGLTTVGLSLR
YRAPIVTAWSTPGAALLIASLPGVPYPYAIGAFVVCALLLTAVGVSGMFDALMKRIPAGIASALLAGILFEIGIEIFHAA
QIRPALVITMFLTYLVVKRLVPRYAIIVTLASGTAVAGALGLLDFSRFHVALAHPVLTLPAFSAASIISIGIPLFIVAMA
SQNVPGIAVLRADGYATPSSPLLAATGLASLVFAPFGSHGINLAAITAAICTGGEAHAEPRRRYTAAVWCGVFYLIAGVF
GATIAALFDALPKALVVSVAALALFGSIMSGLANAMQEVRQREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTHLILNA
RRA

Sequences:

>Translated_403_residues
MNSPHAPATPRAASASRFLVDTSASTLVAGFVAMMTGYTSALVLMFQAGRAAHLSDAQISSWIWALSISMGLTTVGLSLR
YRAPIVTAWSTPGAALLIASLPGVPYPYAIGAFVVCALLLTAVGVSGMFDALMKRIPAGIASALLAGILFEIGIEIFHAA
QIRPALVITMFLTYLVVKRLVPRYAIIVTLASGTAVAGALGLLDFSRFHVALAHPVLTLPAFSAASIISIGIPLFIVAMA
SQNVPGIAVLRADGYATPSSPLLAATGLASLVFAPFGSHGINLAAITAAICTGGEAHAEPRRRYTAAVWCGVFYLIAGVF
GATIAALFDALPKALVVSVAALALFGSIMSGLANAMQEVRQREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTHLILNA
RRA
>Mature_403_residues
MNSPHAPATPRAASASRFLVDTSASTLVAGFVAMMTGYTSALVLMFQAGRAAHLSDAQISSWIWALSISMGLTTVGLSLR
YRAPIVTAWSTPGAALLIASLPGVPYPYAIGAFVVCALLLTAVGVSGMFDALMKRIPAGIASALLAGILFEIGIEIFHAA
QIRPALVITMFLTYLVVKRLVPRYAIIVTLASGTAVAGALGLLDFSRFHVALAHPVLTLPAFSAASIISIGIPLFIVAMA
SQNVPGIAVLRADGYATPSSPLLAATGLASLVFAPFGSHGINLAAITAAICTGGEAHAEPRRRYTAAVWCGVFYLIAGVF
GATIAALFDALPKALVVSVAALALFGSIMSGLANAMQEVRQREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTHLILNA
RRA

Specific function: Unknown

COG id: COG3135

COG function: function code Q; Uncharacterized protein involved in benzoate metabolism

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081909, Length=374, Percent_Identity=45.4545454545455, Blast_Score=308, Evalue=4e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004711 [H]

Pfam domain/function: PF03594 BenE [H]

EC number: NA

Molecular weight: Translated: 41534; Mature: 41534

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPHAPATPRAASASRFLVDTSASTLVAGFVAMMTGYTSALVLMFQAGRAAHLSDAQIS
CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
SWIWALSISMGLTTVGLSLRYRAPIVTAWSTPGAALLIASLPGVPYPYAIGAFVVCALLL
HHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
TAVGVSGMFDALMKRIPAGIASALLAGILFEIGIEIFHAAQIRPALVITMFLTYLVVKRL
HHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPRYAIIVTLASGTAVAGALGLLDFSRFHVALAHPVLTLPAFSAASIISIGIPLFIVAMA
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SQNVPGIAVLRADGYATPSSPLLAATGLASLVFAPFGSHGINLAAITAAICTGGEAHAEP
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCH
RRRYTAAVWCGVFYLIAGVFGATIAALFDALPKALVVSVAALALFGSIMSGLANAMQEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTHLILNARRA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSPHAPATPRAASASRFLVDTSASTLVAGFVAMMTGYTSALVLMFQAGRAAHLSDAQIS
CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
SWIWALSISMGLTTVGLSLRYRAPIVTAWSTPGAALLIASLPGVPYPYAIGAFVVCALLL
HHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
TAVGVSGMFDALMKRIPAGIASALLAGILFEIGIEIFHAAQIRPALVITMFLTYLVVKRL
HHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPRYAIIVTLASGTAVAGALGLLDFSRFHVALAHPVLTLPAFSAASIISIGIPLFIVAMA
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SQNVPGIAVLRADGYATPSSPLLAATGLASLVFAPFGSHGINLAAITAAICTGGEAHAEP
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCH
RRRYTAAVWCGVFYLIAGVFGATIAALFDALPKALVVSVAALALFGSIMSGLANAMQEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTHLILNARRA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]