Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028195
Identifier: 238028195
GI number: 238028195
Start: 3011190
End: 3011771
Strand: Direct
Name: 238028195
Synonym: bglu_1g26470
Alternate gene names: NA
Gene position: 3011190-3011771 (Clockwise)
Preceding gene: 238028194
Following gene: 238028198
Centisome position: 77.08
GC content: 71.31
Gene sequence:
>582_bases ATGGACCCGATCCGCACGCTCGACGACACGCGCCGCGACATCCAGCAATCGCTGCTCGCGCTGTTCAAGGGCATGTCGCT GCGCGAGCGCGTCATGCAGGGCGCGATGATGGCGCTGCGGGCCGTGTGCGGCGCGTGCCTCGCCTACGGCATCGGCCACG CGCTGCATTCGGGGCAGGCGGTCTGGGCCGCGGTGACGGCCATCGCGGTCACCCAGCATCATTACTCGGACACGGTGAAG CTGTCGCGCGACCAGTTCGTCGGCGCGATGGTGGGCGGCGTGCTCGGCTTCGCCGGCGCCGCGCTCGGCAGCTCGACTTT CCCCGCGCAACTGCTCGTCTACGCCGCGGCGATCACGGCGACGATCATGGCCTGCTGGTGCCTCGACGTAGGCAGCGCGG CACGCCTGGGCGGCGTGACCGCCACCATCGTGCTGCTGTTTCCCAGCAACGGCCCGCTGTGGGACATTCCGCTGATCCGG CTAGGCGAGGTCACGCTCGGCACGGTCTGTGCGCTGGTGGTCTGCGCGCTGCTGGCCTGGCTCGAGCGGCAGTGGCGCGG GCGCGGGCGACCCGACGCCTGA
Upstream 100 bases:
>100_bases TCGGTGAGAACCAGCCGGACACCCCGCCCGACGCGCCCGATTCGGCTGGCTCCAGCGACGCTGCCGGCAAGCCGCCGCGG GCCGCCTGACGCGACGCACG
Downstream 100 bases:
>100_bases GCATCGCCCGCGCGCCGCGCCCGAGGCGACACCGCCGCGCGGCCCGTCTCCACGGTCCGAACCGCCCGCACCGTCCAGGC CGCCCTCGCGCCGCCCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MDPIRTLDDTRRDIQQSLLALFKGMSLRERVMQGAMMALRAVCGACLAYGIGHALHSGQAVWAAVTAIAVTQHHYSDTVK LSRDQFVGAMVGGVLGFAGAALGSSTFPAQLLVYAAAITATIMACWCLDVGSAARLGGVTATIVLLFPSNGPLWDIPLIR LGEVTLGTVCALVVCALLAWLERQWRGRGRPDA
Sequences:
>Translated_193_residues MDPIRTLDDTRRDIQQSLLALFKGMSLRERVMQGAMMALRAVCGACLAYGIGHALHSGQAVWAAVTAIAVTQHHYSDTVK LSRDQFVGAMVGGVLGFAGAALGSSTFPAQLLVYAAAITATIMACWCLDVGSAARLGGVTATIVLLFPSNGPLWDIPLIR LGEVTLGTVCALVVCALLAWLERQWRGRGRPDA >Mature_193_residues MDPIRTLDDTRRDIQQSLLALFKGMSLRERVMQGAMMALRAVCGACLAYGIGHALHSGQAVWAAVTAIAVTQHHYSDTVK LSRDQFVGAMVGGVLGFAGAALGSSTFPAQLLVYAAAITATIMACWCLDVGSAARLGGVTATIVLLFPSNGPLWDIPLIR LGEVTLGTVCALVVCALLAWLERQWRGRGRPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20424; Mature: 20424
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00099 THIOLASE_3 ; PS00457 NA_SOLUT_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPIRTLDDTRRDIQQSLLALFKGMSLRERVMQGAMMALRAVCGACLAYGIGHALHSGQA CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VWAAVTAIAVTQHHYSDTVKLSRDQFVGAMVGGVLGFAGAALGSSTFPAQLLVYAAAITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TIMACWCLDVGSAARLGGVTATIVLLFPSNGPLWDIPLIRLGEVTLGTVCALVVCALLAW HHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCEECCCHHHHCHHHHHHHHHHHHHHHHHH LERQWRGRGRPDA HHHHHCCCCCCCC >Mature Secondary Structure MDPIRTLDDTRRDIQQSLLALFKGMSLRERVMQGAMMALRAVCGACLAYGIGHALHSGQA CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VWAAVTAIAVTQHHYSDTVKLSRDQFVGAMVGGVLGFAGAALGSSTFPAQLLVYAAAITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TIMACWCLDVGSAARLGGVTATIVLLFPSNGPLWDIPLIRLGEVTLGTVCALVVCALLAW HHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCEECCCHHHHCHHHHHHHHHHHHHHHHHH LERQWRGRGRPDA HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA