Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028194

Identifier: 238028194

GI number: 238028194

Start: 3009877

End: 3011178

Strand: Direct

Name: 238028194

Synonym: bglu_1g26460

Alternate gene names: NA

Gene position: 3009877-3011178 (Clockwise)

Preceding gene: 238028193

Following gene: 238028195

Centisome position: 77.05

GC content: 71.81

Gene sequence:

>1302_bases
ATGACGGGAACCAATACGGTCAGCACCCGCAGCCTGCGCGCCCTCGACTGGGTCAACTTCTTCGTCGCGAACGTGCAGAC
GGGCTTCGGCCCCTTCATCGCCTCCTATCTCGCCTCGCACAAGTGGACGCAGGGCGAGATCGGCCTGGTGCTGTCGATCG
GCACCATCAGCGCGATGGTCAGCCAGGTGCCGGGCGGTGCCGCCGTCGACGCGCTGAAGAACAAGAAGGGCGCCGCGGCC
TGGGCGATCATGGCGATCATCCTGTCGGCGGTGCTGCTCGCCGCCAGCCCGACCATCGTGCCGGTGATCGCGGCCGAGGT
GTTCCACGGCTTCGCGAGCTGCATGCTGGTGCCCGCGATGGCGGCGATCTCGTTCTCGCTGGTGGGCCGCGCGAACCTTG
GCGACCGGCTCGGCCGCAACGCGCGCTGGGCCTCGATCGGCAGCGCGGTGGCCGCGGGCCTGATGGGGCTGACGGGCGAA
TACGTGTCGGCGCGCGCGGTGTTCTGGTTGACGGCCGCGCTCGCGCTGCCGGCGCTGGTCGCGCTCTCGATGATCCAGCC
GACCCACACGGTCGCGCCGCCGCCGGGCAACCGCCCGCGCGAGGCGAGCGCCGACGGCGAGCCGCGAGAGACGATCCTCG
ATCTGCTGCGCGACCGGCGCATGCTGGTGTTCGCCGCCTGCGTGGTGCTGTTCCACCTGTCGAATGCGGCGATGCTGAAC
CTCGCGGCCGGCGAAGTGACGGCTGGCATGGGCGACAACGTGCAGCTCGTGATCGCGGCCTGCATCATCGTCCCGCAGGC
GATCGTGGCGATGCTCTCGCCCTGGGTGGGCCGCTCCGCGCAGCGCTGGGGGCGCCGGCCGATCCTGCTGCTCGGCTTCT
CGGCGCTGCCGGTACGCGCGCTGCTGTTCGCGGGCGTCAGCAGCCCGTACCTGCTGGTGCCGGTGCAGATGCTCGACGGC
ATCAGTGCGGCCGTGTTCGGCGTGATGCTGCCGCTGATCGCCGCCGACGTGGCGGGCGGCAAGGGCCGCTACAACCTCTG
CATCGGCCTGTTCGGGCTCGCGGCCGGCATCGGCGCGACGCTGAGCACCTCGCTCGCCGGCTTCGCGGCCGACCATTTCG
GCAACACCATGAGCTTCTTCGGACTCGCGGCGGCAGGCGCGCTCGCCGTGCTGCTGGTGGCACTGGCGATGCCGGAGACG
CGCGACGCCGGGCTCGGTGAGAACCAGCCGGACACCCCGCCCGACGCGCCCGATTCGGCTGGCTCCAGCGACGCTGCCGG
CAAGCCGCCGCGGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCGAGGCGCAGCTGAAGGCGGCGCCGCCCTATGCGGCCGACAAACCGGTGATCGCCGTGTCGCCGCCGGCGAGCCAGGCG
TCCAGCGCGGGAACCAGCCG

Downstream 100 bases:

>100_bases
CGCGACGCACGATGGACCCGATCCGCACGCTCGACGACACGCGCCGCGACATCCAGCAATCGCTGCTCGCGCTGTTCAAG
GGCATGTCGCTGCGCGAGCG

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTGTNTVSTRSLRALDWVNFFVANVQTGFGPFIASYLASHKWTQGEIGLVLSIGTISAMVSQVPGGAAVDALKNKKGAAA
WAIMAIILSAVLLAASPTIVPVIAAEVFHGFASCMLVPAMAAISFSLVGRANLGDRLGRNARWASIGSAVAAGLMGLTGE
YVSARAVFWLTAALALPALVALSMIQPTHTVAPPPGNRPREASADGEPRETILDLLRDRRMLVFAACVVLFHLSNAAMLN
LAAGEVTAGMGDNVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFSALPVRALLFAGVSSPYLLVPVQMLDG
ISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGIGATLSTSLAGFAADHFGNTMSFFGLAAAGALAVLLVALAMPET
RDAGLGENQPDTPPDAPDSAGSSDAAGKPPRAA

Sequences:

>Translated_433_residues
MTGTNTVSTRSLRALDWVNFFVANVQTGFGPFIASYLASHKWTQGEIGLVLSIGTISAMVSQVPGGAAVDALKNKKGAAA
WAIMAIILSAVLLAASPTIVPVIAAEVFHGFASCMLVPAMAAISFSLVGRANLGDRLGRNARWASIGSAVAAGLMGLTGE
YVSARAVFWLTAALALPALVALSMIQPTHTVAPPPGNRPREASADGEPRETILDLLRDRRMLVFAACVVLFHLSNAAMLN
LAAGEVTAGMGDNVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFSALPVRALLFAGVSSPYLLVPVQMLDG
ISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGIGATLSTSLAGFAADHFGNTMSFFGLAAAGALAVLLVALAMPET
RDAGLGENQPDTPPDAPDSAGSSDAAGKPPRAA
>Mature_432_residues
TGTNTVSTRSLRALDWVNFFVANVQTGFGPFIASYLASHKWTQGEIGLVLSIGTISAMVSQVPGGAAVDALKNKKGAAAW
AIMAIILSAVLLAASPTIVPVIAAEVFHGFASCMLVPAMAAISFSLVGRANLGDRLGRNARWASIGSAVAAGLMGLTGEY
VSARAVFWLTAALALPALVALSMIQPTHTVAPPPGNRPREASADGEPRETILDLLRDRRMLVFAACVVLFHLSNAAMLNL
AAGEVTAGMGDNVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFSALPVRALLFAGVSSPYLLVPVQMLDGI
SAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGIGATLSTSLAGFAADHFGNTMSFFGLAAAGALAVLLVALAMPETR
DAGLGENQPDTPPDAPDSAGSSDAAGKPPRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44361; Mature: 44230

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTNTVSTRSLRALDWVNFFVANVQTGFGPFIASYLASHKWTQGEIGLVLSIGTISAMV
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH
SQVPGGAAVDALKNKKGAAAWAIMAIILSAVLLAASPTIVPVIAAEVFHGFASCMLVPAM
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAISFSLVGRANLGDRLGRNARWASIGSAVAAGLMGLTGEYVSARAVFWLTAALALPALV
HHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALSMIQPTHTVAPPPGNRPREASADGEPRETILDLLRDRRMLVFAACVVLFHLSNAAMLN
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
LAAGEVTAGMGDNVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFSALPVRA
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHCCCCEEEECCCHHHHHH
LLFAGVSSPYLLVPVQMLDGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGIGAT
HHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LSTSLAGFAADHFGNTMSFFGLAAAGALAVLLVALAMPETRDAGLGENQPDTPPDAPDSA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GSSDAAGKPPRAA
CCCCCCCCCCCCC
>Mature Secondary Structure 
TGTNTVSTRSLRALDWVNFFVANVQTGFGPFIASYLASHKWTQGEIGLVLSIGTISAMV
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH
SQVPGGAAVDALKNKKGAAAWAIMAIILSAVLLAASPTIVPVIAAEVFHGFASCMLVPAM
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAISFSLVGRANLGDRLGRNARWASIGSAVAAGLMGLTGEYVSARAVFWLTAALALPALV
HHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALSMIQPTHTVAPPPGNRPREASADGEPRETILDLLRDRRMLVFAACVVLFHLSNAAMLN
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
LAAGEVTAGMGDNVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFSALPVRA
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHCCCCEEEECCCHHHHHH
LLFAGVSSPYLLVPVQMLDGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGIGAT
HHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LSTSLAGFAADHFGNTMSFFGLAAAGALAVLLVALAMPETRDAGLGENQPDTPPDAPDSA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GSSDAAGKPPRAA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]