Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028193
Identifier: 238028193
GI number: 238028193
Start: 3008903
End: 3009880
Strand: Direct
Name: 238028193
Synonym: bglu_1g26450
Alternate gene names: NA
Gene position: 3008903-3009880 (Clockwise)
Preceding gene: 238028192
Following gene: 238028194
Centisome position: 77.02
GC content: 73.01
Gene sequence:
>978_bases ATGAGCGGCGGCCTTACGCGTCTAGCAATCCGTTTCCCGAAATTCGTCGCCTCCGCGGCGCCTCTCCTCACCGCGCTAGC CGCCACGCTTGCGCTGTCGGGTTGCGCGCTGTTCCAGGCGCCGCAGCGGCCCGCGCCGATCGTCGACGCGGCGGTCGAGA CGCTCGACGAGGAGGGGCTGCCGGTCGCCATGCCGGAGCCCGCCTCCGAGGTCGAGGCCCCCGAGGACACCGACACCCAG AAAAAGCCGCGCCACGAGGCGCCGCGCCCGCGCGTGGTCAAGCGCCCGGCAGCGCCGCCGCCGCCACCACCGCCGCCGCC CCCGCCCCCGCCGCTGATCCAGACCCGCACGATCGAGCGCAACCAGGTGCACTCGCTGCTCGACAGCGAGGTGCGCCGCC GCGACGGCAAGATGATCGGCCGGGCCGTGGACATGATCGCGGACACGAGCGGCAAGCCGGACCGCATGATCGTCAACCTG CAAGGCTTCCTCGGCGTCGGCGACCGCAAGGTCAGCTTTCCGTGGCGGCTGTTCCGCTTCACGCCGGGCGGCCGCGACCA GCCGATCCTGCTCGACGTGCCGTCCGGCACGCTGCCGGTTGCCGACCGTCCGAAGGCGGTGTCGCTGAGCGGCGCCTCGC ATGCAGGCGAGGCGCCGGGAACCATCGCGATGGTCGACGCCGACGTCGAGCGCAGCAACGGCAGCGCGGTCGGCCGCATC GTCGACGTGCTGATCGGTCGCGATGGGCAGCCACAGGCGGTCGTGCTCGACCTGGGCGGCCTCGTGAGTCCGGACCGGCG CACCATCGCCGCGAGCTGGTCGGCGCTGCGCTTCGTGCCGAAGGACAAGTCGCTGCGCGCGCTGCTCGACCTCTCCGAGG CGCAGCTGAAGGCGGCGCCGCCCTATGCGGCCGACAAACCGGTGATCGCCGTGTCGCCGCCGGCGAGCCAGGCGTCCAGC GCGGGAACCAGCCGATGA
Upstream 100 bases:
>100_bases ACAGGGTACACTCTGACCCTGCGATGCCGTCGGCGGCATCGGCCATCAATCGCCGCAGCACCGCATCCGCGGCCTGCGCC GGCCCATGGAGTCCCAGTTG
Downstream 100 bases:
>100_bases CGGGAACCAATACGGTCAGCACCCGCAGCCTGCGCGCCCTCGACTGGGTCAACTTCTTCGTCGCGAACGTGCAGACGGGC TTCGGCCCCTTCATCGCCTC
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSGGLTRLAIRFPKFVASAAPLLTALAATLALSGCALFQAPQRPAPIVDAAVETLDEEGLPVAMPEPASEVEAPEDTDTQ KKPRHEAPRPRVVKRPAAPPPPPPPPPPPPPLIQTRTIERNQVHSLLDSEVRRRDGKMIGRAVDMIADTSGKPDRMIVNL QGFLGVGDRKVSFPWRLFRFTPGGRDQPILLDVPSGTLPVADRPKAVSLSGASHAGEAPGTIAMVDADVERSNGSAVGRI VDVLIGRDGQPQAVVLDLGGLVSPDRRTIAASWSALRFVPKDKSLRALLDLSEAQLKAAPPYAADKPVIAVSPPASQASS AGTSR
Sequences:
>Translated_325_residues MSGGLTRLAIRFPKFVASAAPLLTALAATLALSGCALFQAPQRPAPIVDAAVETLDEEGLPVAMPEPASEVEAPEDTDTQ KKPRHEAPRPRVVKRPAAPPPPPPPPPPPPPLIQTRTIERNQVHSLLDSEVRRRDGKMIGRAVDMIADTSGKPDRMIVNL QGFLGVGDRKVSFPWRLFRFTPGGRDQPILLDVPSGTLPVADRPKAVSLSGASHAGEAPGTIAMVDADVERSNGSAVGRI VDVLIGRDGQPQAVVLDLGGLVSPDRRTIAASWSALRFVPKDKSLRALLDLSEAQLKAAPPYAADKPVIAVSPPASQASS AGTSR >Mature_324_residues SGGLTRLAIRFPKFVASAAPLLTALAATLALSGCALFQAPQRPAPIVDAAVETLDEEGLPVAMPEPASEVEAPEDTDTQK KPRHEAPRPRVVKRPAAPPPPPPPPPPPPPLIQTRTIERNQVHSLLDSEVRRRDGKMIGRAVDMIADTSGKPDRMIVNLQ GFLGVGDRKVSFPWRLFRFTPGGRDQPILLDVPSGTLPVADRPKAVSLSGASHAGEAPGTIAMVDADVERSNGSAVGRIV DVLIGRDGQPQAVVLDLGGLVSPDRRTIAASWSALRFVPKDKSLRALLDLSEAQLKAAPPYAADKPVIAVSPPASQASSA GTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34246; Mature: 34114
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGLTRLAIRFPKFVASAAPLLTALAATLALSGCALFQAPQRPAPIVDAAVETLDEEGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PVAMPEPASEVEAPEDTDTQKKPRHEAPRPRVVKRPAAPPPPPPPPPPPPPLIQTRTIER CEECCCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCH NQVHSLLDSEVRRRDGKMIGRAVDMIADTSGKPDRMIVNLQGFLGVGDRKVSFPWRLFRF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHCCCCCCEECCCEEEEEE TPGGRDQPILLDVPSGTLPVADRPKAVSLSGASHAGEAPGTIAMVDADVERSNGSAVGRI CCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHH VDVLIGRDGQPQAVVLDLGGLVSPDRRTIAASWSALRFVPKDKSLRALLDLSEAQLKAAP HHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCC PYAADKPVIAVSPPASQASSAGTSR CCCCCCCEEEECCCCHHHCCCCCCC >Mature Secondary Structure SGGLTRLAIRFPKFVASAAPLLTALAATLALSGCALFQAPQRPAPIVDAAVETLDEEGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PVAMPEPASEVEAPEDTDTQKKPRHEAPRPRVVKRPAAPPPPPPPPPPPPPLIQTRTIER CEECCCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCH NQVHSLLDSEVRRRDGKMIGRAVDMIADTSGKPDRMIVNLQGFLGVGDRKVSFPWRLFRF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHCCCCCCEECCCEEEEEE TPGGRDQPILLDVPSGTLPVADRPKAVSLSGASHAGEAPGTIAMVDADVERSNGSAVGRI CCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHH VDVLIGRDGQPQAVVLDLGGLVSPDRRTIAASWSALRFVPKDKSLRALLDLSEAQLKAAP HHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCC PYAADKPVIAVSPPASQASSAGTSR CCCCCCCEEEECCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA