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The map label for this gene is degU [H]

Identifier: 238028111

GI number: 238028111

Start: 2926223

End: 2927053

Strand: Direct

Name: degU [H]

Synonym: bglu_1g25620

Alternate gene names: 238028111

Gene position: 2926223-2927053 (Clockwise)

Preceding gene: 238028110

Following gene: 238028112

Centisome position: 74.91

GC content: 66.67

Gene sequence:

>831_bases
ATGCGATTCATGGTGTTGAGTTCCGACGCGGAGCGCCGCGATGGTCTGAGGGCCCTGCTCAGGCAAATCGACCGACATGG
CGGCCACAACGATGCCAAGGACTGGCGGCAGGCCATGCGCCTCGTCCGGCAACAAAGCTTCGACCTGATCGTCGTCGACT
TCCTTTCTGCGATGCGGCTCGACGATCTTCGCGCATTGTGCGGGGCCTGCGCCCCGACACCGGTGGCGATGCTGGTCGAC
ACGACCTCGCCCGCCATCGCGCCGGACCAGTTCTCGACCGGCGTGCAAGGCGTCGTGCCGCGCGGGATGGGCGCCCATCT
CGTGATCCGCGCCTTCGAGATGGTCCTGCTCGGCGGCTACTACGTGCCACCCTGCGCACTGAATCTGCTCGACGCCGACG
CGGCCGAGCAGCGCGCCACACGCCGCCTGGGCAGCATTCCACTGCGGCGCCAGCCCAGCATCGGCACGCTTTCGCCACGT
CAGGCCCAGATCATGCGCTTCGTCCACATGGGCAACACGAACAAGATGATCGCACGCACACTCGGCATCAGCGAAGGAAC
CGTCAAGATCCATCTCGCCAGCATCTTCCAGCAACTGGGCGCCACCAACCGCGCCGCTGCCGTCGCCATCTACAACGGCT
GGCTGCCGTCCCATCTGGAAGTGCTGATCGCCGAACGCCGGGGCCAGCCGCGGCCAACTCTCGGCGCGCCCTGCCCGATC
CCGTTACGCGCCGCTAGATCTCGAGGCAAGTACCGGCCTATCACGTTCGACGGCCCCCATCTGCCGATGGTCGCCGAGCC
GGAGCCGGCGACGCTGAAACGCAACACCTAG

Upstream 100 bases:

>100_bases
TATGTCGTTTGGCTAGGCCGACACGGCACAAGCGTTTTGTCATCATGGCCTCAGCATTTCAGGTCATCACCGACAAACGC
AACGATTAGAGAGGCAACAA

Downstream 100 bases:

>100_bases
ACTCGCGCCTGGCGTCGATTCGATTCCCATTTTTTTGCGTCAACGAGTAAGATTAAACGCATGGGTTTCCTCTACACGCC
GCTTCCGCTCTGGGTCGCCG

Product: putative DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRFMVLSSDAERRDGLRALLRQIDRHGGHNDAKDWRQAMRLVRQQSFDLIVVDFLSAMRLDDLRALCGACAPTPVAMLVD
TTSPAIAPDQFSTGVQGVVPRGMGAHLVIRAFEMVLLGGYYVPPCALNLLDADAAEQRATRRLGSIPLRRQPSIGTLSPR
QAQIMRFVHMGNTNKMIARTLGISEGTVKIHLASIFQQLGATNRAAAVAIYNGWLPSHLEVLIAERRGQPRPTLGAPCPI
PLRAARSRGKYRPITFDGPHLPMVAEPEPATLKRNT

Sequences:

>Translated_276_residues
MRFMVLSSDAERRDGLRALLRQIDRHGGHNDAKDWRQAMRLVRQQSFDLIVVDFLSAMRLDDLRALCGACAPTPVAMLVD
TTSPAIAPDQFSTGVQGVVPRGMGAHLVIRAFEMVLLGGYYVPPCALNLLDADAAEQRATRRLGSIPLRRQPSIGTLSPR
QAQIMRFVHMGNTNKMIARTLGISEGTVKIHLASIFQQLGATNRAAAVAIYNGWLPSHLEVLIAERRGQPRPTLGAPCPI
PLRAARSRGKYRPITFDGPHLPMVAEPEPATLKRNT
>Mature_276_residues
MRFMVLSSDAERRDGLRALLRQIDRHGGHNDAKDWRQAMRLVRQQSFDLIVVDFLSAMRLDDLRALCGACAPTPVAMLVD
TTSPAIAPDQFSTGVQGVVPRGMGAHLVIRAFEMVLLGGYYVPPCALNLLDADAAEQRATRRLGSIPLRRQPSIGTLSPR
QAQIMRFVHMGNTNKMIARTLGISEGTVKIHLASIFQQLGATNRAAAVAIYNGWLPSHLEVLIAERRGQPRPTLGAPCPI
PLRAARSRGKYRPITFDGPHLPMVAEPEPATLKRNT

Specific function: Regulating factor for the production of extracellular proteases. The N-terminal region acts as an inhibitor, whereas the C-terminal region carries enhancing activity [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 30309; Mature: 30309

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFMVLSSDAERRDGLRALLRQIDRHGGHNDAKDWRQAMRLVRQQSFDLIVVDFLSAMRL
CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DDLRALCGACAPTPVAMLVDTTSPAIAPDQFSTGVQGVVPRGMGAHLVIRAFEMVLLGGY
HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
YVPPCALNLLDADAAEQRATRRLGSIPLRRQPSIGTLSPRQAQIMRFVHMGNTNKMIART
CCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
LGISEGTVKIHLASIFQQLGATNRAAAVAIYNGWLPSHLEVLIAERRGQPRPTLGAPCPI
HCCCCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PLRAARSRGKYRPITFDGPHLPMVAEPEPATLKRNT
CHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MRFMVLSSDAERRDGLRALLRQIDRHGGHNDAKDWRQAMRLVRQQSFDLIVVDFLSAMRL
CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DDLRALCGACAPTPVAMLVDTTSPAIAPDQFSTGVQGVVPRGMGAHLVIRAFEMVLLGGY
HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
YVPPCALNLLDADAAEQRATRRLGSIPLRRQPSIGTLSPRQAQIMRFVHMGNTNKMIART
CCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
LGISEGTVKIHLASIFQQLGATNRAAAVAIYNGWLPSHLEVLIAERRGQPRPTLGAPCPI
HCCCCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PLRAARSRGKYRPITFDGPHLPMVAEPEPATLKRNT
CHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7765823 [H]