| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028112
Identifier: 238028112
GI number: 238028112
Start: 2927114
End: 2927788
Strand: Direct
Name: 238028112
Synonym: bglu_1g25630
Alternate gene names: NA
Gene position: 2927114-2927788 (Clockwise)
Preceding gene: 238028111
Following gene: 238028113
Centisome position: 74.93
GC content: 66.96
Gene sequence:
>675_bases ATGGGTTTCCTCTACACGCCGCTTCCGCTCTGGGTCGCCGCCGGTGGCTGGGTCGCTGCCGTGGCCGTACTCGTGCTCGC GTCATGGGGACGTCCTTTCAGCCGGCTCAGGGATCCGACGCTGCAACATGTATGGTGTGCGCTGATCGCCACCATTACGG TGCTGTGGGCGTCGAATGCGTGGCTCGACGACGGGCTCGTGATGCATCTGCTCGGCGCGACGCTGATCGCCACGCTGTTC GACTGGACGCTCGCCCTGATCGCGATGGGTGCCGTTACCGGTATCGCCGCGGTGGTGTTCGACGCGACCTGGCAGGGTAT CGGGTTGAGCTATCTCGTCTACGGTGCGCTGCCGGTGGCCGTATCGACGCTGCTACAACGCGCCACGGTTGCCTGGCTGC CGCACAGCCTGTTCGCGTTCATCGTCGGGCAAGGCTTTATCGCACCGGCCATCACGATCGGCGTGGTCGCGGCGGCCGCG GCTGGTGTGCAACTCGGGCTCGCAAACGGCTCGACGATCGTCATTCCGGCCGGCTATGGCCTGAACACGCTGCTGCTCGC GCTGGGCGAAGCCTGGTTCACCGGCATGGCGACGGCGCTGATCGCCATCTACAAGCCAGCCTGGGTCACCACCTTCGACG TGCGCCGCTACCGCCTGGGCGGCCCGCGCGCCTGA
Upstream 100 bases:
>100_bases CGCCGAGCCGGAGCCGGCGACGCTGAAACGCAACACCTAGACTCGCGCCTGGCGTCGATTCGATTCCCATTTTTTTGCGT CAACGAGTAAGATTAAACGC
Downstream 100 bases:
>100_bases AATCCACTGCGGCTTCCAATGCATGAGCCGGCCCTGTTTGGAACGACGGAGGCGCCATTACCGAAGCTTTCGCCGTCATT TGCGGGAGGCAGGTCAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin Biosynthesis Protein CbiM Homolog
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MGFLYTPLPLWVAAGGWVAAVAVLVLASWGRPFSRLRDPTLQHVWCALIATITVLWASNAWLDDGLVMHLLGATLIATLF DWTLALIAMGAVTGIAAVVFDATWQGIGLSYLVYGALPVAVSTLLQRATVAWLPHSLFAFIVGQGFIAPAITIGVVAAAA AGVQLGLANGSTIVIPAGYGLNTLLLALGEAWFTGMATALIAIYKPAWVTTFDVRRYRLGGPRA
Sequences:
>Translated_224_residues MGFLYTPLPLWVAAGGWVAAVAVLVLASWGRPFSRLRDPTLQHVWCALIATITVLWASNAWLDDGLVMHLLGATLIATLF DWTLALIAMGAVTGIAAVVFDATWQGIGLSYLVYGALPVAVSTLLQRATVAWLPHSLFAFIVGQGFIAPAITIGVVAAAA AGVQLGLANGSTIVIPAGYGLNTLLLALGEAWFTGMATALIAIYKPAWVTTFDVRRYRLGGPRA >Mature_223_residues GFLYTPLPLWVAAGGWVAAVAVLVLASWGRPFSRLRDPTLQHVWCALIATITVLWASNAWLDDGLVMHLLGATLIATLFD WTLALIAMGAVTGIAAVVFDATWQGIGLSYLVYGALPVAVSTLLQRATVAWLPHSLFAFIVGQGFIAPAITIGVVAAAAA GVQLGLANGSTIVIPAGYGLNTLLLALGEAWFTGMATALIAIYKPAWVTTFDVRRYRLGGPRA
Specific function: Unknown
COG id: COG3235
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23574; Mature: 23443
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLYTPLPLWVAAGGWVAAVAVLVLASWGRPFSRLRDPTLQHVWCALIATITVLWASNA CCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCC WLDDGLVMHLLGATLIATLFDWTLALIAMGAVTGIAAVVFDATWQGIGLSYLVYGALPVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VSTLLQRATVAWLPHSLFAFIVGQGFIAPAITIGVVAAAAAGVQLGLANGSTIVIPAGYG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCC LNTLLLALGEAWFTGMATALIAIYKPAWVTTFDVRRYRLGGPRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCC >Mature Secondary Structure GFLYTPLPLWVAAGGWVAAVAVLVLASWGRPFSRLRDPTLQHVWCALIATITVLWASNA CCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCC WLDDGLVMHLLGATLIATLFDWTLALIAMGAVTGIAAVVFDATWQGIGLSYLVYGALPVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VSTLLQRATVAWLPHSLFAFIVGQGFIAPAITIGVVAAAAAGVQLGLANGSTIVIPAGYG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCC LNTLLLALGEAWFTGMATALIAIYKPAWVTTFDVRRYRLGGPRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA