| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028110
Identifier: 238028110
GI number: 238028110
Start: 2924820
End: 2926037
Strand: Direct
Name: 238028110
Synonym: bglu_1g25610
Alternate gene names: NA
Gene position: 2924820-2926037 (Clockwise)
Preceding gene: 238028106
Following gene: 238028111
Centisome position: 74.87
GC content: 65.35
Gene sequence:
>1218_bases ATGCGCCAGCGAACCGCCAAACGCCTTCCCCCCGATGCCGACAAACTAGTCGGACTGTCGCTCGCGCTGTTCGCCTCCGG CAGCCGTGTCGAGGACCGGTTCTGGGAAGCGAAGCTCGACGCGCTACTCACCAAGGTGATCCGCAACGGCAATCAGACCA CGCTCGATGCGGCGCTCGACCATCTGCAACAGAATCACCCCGACGCCTACGGGGCGCTCGCCGATATGGCCGAAACCCAC AGCGAATCGCTGCTGGTGGAGCATGAGGACAGGATGCATGAGGCCCTGTTGGTAGCCGTGCCAATCCTCGCCTGGACGCG CTATATGATTCCGTCGGGCCCGATCAAGACGGAGATCGCGGACGTGCTGCGCACGCATCTGCAGGCGCACGTGCTCGCCG AGCACGCACATGTGGCGCTGGCGCCCTTCCTGTACAGCATCGACCAGTTGCCTCGCCATCATGTCGAGGCCTATCGTCTC ACGCAGCAATTGGCACAGGCCGCACTCGGCGGCCAACCCCCGCGCCTCAACTTCGGCGACCTGCCCGAAACCTCTCCGAT CCTCGCCGACCCGCGCTTCCTGCTGGCCGTAGTCGCCACGCCCGCCGGCTCACCGATGTTTCGCTGGCAAGAAGAAGACC AGGGCGTGCGCATCGAGCGCAGCCAATGCCTCGAGCAATGGACGAGCCAAGGGGGCGGCAATCTGTCGAACGCGCTGCCC GGCTGCGAATTCGAGTGCCTGCTGCCGGATGCCTACTATTCGGCCTGCCGCGACGCCGACGAGCGCGTGCGCCCGCATAC GGTCCGCACCGCGATCCGCTATCTGTTCGACACGATCGGCGCGGCGCCGCAGGAACTTCGAGCCGTGGTCGCGGGCTTCG GCGAACGCCGCATCGACGAATATCGGATTGGCTTCACGCGCCGCGGCAGCAACGACGTGATCTACGGCGTCGTATGGCCG CTCTATGGGCGCGAAAACGGCGACATCGCCGCCGAGGACACCATGCTCGAGACCGAGACGCCAGTCGACGGCCCCGTCGA GGAAATCGTCTCGCTGCTGAGGGAAACCGGCGTCACCGACATCCGTCGCCACGCCAGCCGTTTCGAGCCGGAGTACTGCG ACGATTGTGGCGTTCCCTTGTACGCCGACCCCCTGGGTGAAATCGTCCATGCGGAAATGCCGGAGGACGCATCGCCCGCT CAGCCGCATTTTCACTGA
Upstream 100 bases:
>100_bases CCGACGATGAATTCATCGGGACTTCCCGACGATTCGCTGCATACTTCTGGAACGGACTAAAATGATGGGTTCAACGCACC CACCTAATCCATTCAGATCT
Downstream 100 bases:
>100_bases GTCGCAGCACCGACCCGCGTCACCGTCAGTGACAAAGAGCCGCCCGAGGGGCGGCTCTTTTTTTTCGCATACTGACATTT CCGCTTATGTCGTTTGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLTKVIRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESLLVEHEDRMHEALLVAVPILAWTRYMIPSGPIKTEIADVLRTHLQAHVLAEHAHVALAPFLYSIDQLPRHHVEAYRL TQQLAQAALGGQPPRLNFGDLPETSPILADPRFLLAVVATPAGSPMFRWQEEDQGVRIERSQCLEQWTSQGGGNLSNALP GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTIGAAPQELRAVVAGFGERRIDEYRIGFTRRGSNDVIYGVVWP LYGRENGDIAAEDTMLETETPVDGPVEEIVSLLRETGVTDIRRHASRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPA QPHFH
Sequences:
>Translated_405_residues MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLTKVIRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESLLVEHEDRMHEALLVAVPILAWTRYMIPSGPIKTEIADVLRTHLQAHVLAEHAHVALAPFLYSIDQLPRHHVEAYRL TQQLAQAALGGQPPRLNFGDLPETSPILADPRFLLAVVATPAGSPMFRWQEEDQGVRIERSQCLEQWTSQGGGNLSNALP GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTIGAAPQELRAVVAGFGERRIDEYRIGFTRRGSNDVIYGVVWP LYGRENGDIAAEDTMLETETPVDGPVEEIVSLLRETGVTDIRRHASRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPA QPHFH >Mature_405_residues MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLTKVIRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESLLVEHEDRMHEALLVAVPILAWTRYMIPSGPIKTEIADVLRTHLQAHVLAEHAHVALAPFLYSIDQLPRHHVEAYRL TQQLAQAALGGQPPRLNFGDLPETSPILADPRFLLAVVATPAGSPMFRWQEEDQGVRIERSQCLEQWTSQGGGNLSNALP GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTIGAAPQELRAVVAGFGERRIDEYRIGFTRRGSNDVIYGVVWP LYGRENGDIAAEDTMLETETPVDGPVEEIVSLLRETGVTDIRRHASRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPA QPHFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45103; Mature: 45103
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLTKVIRNGNQTTLDAALD CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HLQQNHPDAYGALADMAETHSESLLVEHEDRMHEALLVAVPILAWTRYMIPSGPIKTEIA HHHHCCCHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DVLRTHLQAHVLAEHAHVALAPFLYSIDQLPRHHVEAYRLTQQLAQAALGGQPPRLNFGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LPETSPILADPRFLLAVVATPAGSPMFRWQEEDQGVRIERSQCLEQWTSQGGGNLSNALP CCCCCCCCCCCHHHHHEEECCCCCCCEECCCCCCCCEEHHHHHHHHHHHCCCCCCHHCCC GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTIGAAPQELRAVVAGFGERRIDE CCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRIGFTRRGSNDVIYGVVWPLYGRENGDIAAEDTMLETETPVDGPVEEIVSLLRETGVTD HHCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCHHH IRRHASRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPAQPHFH HHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLTKVIRNGNQTTLDAALD CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HLQQNHPDAYGALADMAETHSESLLVEHEDRMHEALLVAVPILAWTRYMIPSGPIKTEIA HHHHCCCHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DVLRTHLQAHVLAEHAHVALAPFLYSIDQLPRHHVEAYRLTQQLAQAALGGQPPRLNFGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LPETSPILADPRFLLAVVATPAGSPMFRWQEEDQGVRIERSQCLEQWTSQGGGNLSNALP CCCCCCCCCCCHHHHHEEECCCCCCCEECCCCCCCCEEHHHHHHHHHHHCCCCCCHHCCC GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTIGAAPQELRAVVAGFGERRIDE CCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRIGFTRRGSNDVIYGVVWPLYGRENGDIAAEDTMLETETPVDGPVEEIVSLLRETGVTD HHCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCHHH IRRHASRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPAQPHFH HHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA