Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027662

Identifier: 238027662

GI number: 238027662

Start: 2272423

End: 2273529

Strand: Reverse

Name: 238027662

Synonym: bglu_1g20830

Alternate gene names: NA

Gene position: 2273529-2272423 (Counterclockwise)

Preceding gene: 238027663

Following gene: 238027658

Centisome position: 58.2

GC content: 62.78

Gene sequence:

>1107_bases
ATGATCGGGCGACGGAAGAAGGCGTCACCGCTGCCCGCGCGCGTCTACGAGAAGCACGGTTCGTGGTACTTCGTCGATAT
GCGCCGGAAGTGGCACCGCCTTTGCAGTACGACCGATGGGCTCACGCGCCTCTATGAGCAACTCGCAAAGTTCAACCGCG
AGGCGGATGAACGAGGTATTGCCGACACGATGCCTGCGCTCATCGACGACTGGCTGCTGGTAAAGCTCCCGAAGTATGCG
CTGAAGACGCGCGAGGAATACCGGCGCATGGCGACATTCGTCAAATCGGAGTTCGGGCCGCAGTGGACAGTCGAGGACGT
GCGCCCGGCCGACATCGCCCGGTTCCTCGACAAGCACTTCTCGACGAAACCGAACACCAGCAACAAATACAAGGCGCTCC
TGTCGCTGATCTTCGCGCACGCCGTGCGCAAGGGGCTGCGCGATCGCAATCCGGCGCGCGAGGTCGCCGGCGCCGAGGAG
AAGGCGCGCGACCGCTACATCACGGACATGGAGCTGGAGGCTGTCCGCGCTGCCGCGCTCGTTGGGTTGGACGGACGCCC
GACCGCATCCGGAACGACGATCGTCTGCCTTATCGACCTGGCCTATCAGACCGCACAACGCATCGGCGATCTGCTTGCGC
TGAACTGGCAAGATGTCAGCAACGACGGACTCTTCTTCCATCCCTCGAAAACGGTAAACAGCAGTGGCGTGCGCCTCCTG
ATTCAATTGACGCCGGACTTGCGCGCCACGCTCGACGCGGCGAAGGCCGGCAAGGTGAAAGCAATCGGACCGATCATCTG
CACGCAGGACGGCGCGCGCTATACCTACAGCGGCGCACAGACAGCATGGAAACGGGCGATTAAGCGCGCGCGCAAGTCCT
ATGAGGGCGAGTGCGCTGCGAAGGGCACGGAGCCGGATCCTCGGTTTCTCGTCGGTATGCATTTCCATGACCTGAGAGCG
AAAGCCCTTACCGACAAGCAGCGGCTCGAGGGTGCGAGAGCGGCGCAGGCACTCGCAGGACACACCACGGCGGAAATGAC
CGCGCACTACACCAAAGCTCGCGAAGTGGAGCGTGTGACACCCGTTCCGATGCGTCGCACCAGTTGA

Upstream 100 bases:

>100_bases
GCGCGTGTGGCGACACCATATCGCAGGCATCAGCATCCCGAAGAATCAGGAGCGAAGCCGGCGCCGTCCGCAACTCACTT
CCGACATGAAGGCGGCGTAG

Downstream 100 bases:

>100_bases
TTTTTGTCGTCTAACTTGGGGTGAAATCCCATCGCAAAGCCGCACCAGAAGCTGATTAAGAATTAGGCATCAAGTTAGAC
AAAATGGCCTAAGTATCTGA

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase; Phage Integrase Family Site Specific Recombinase; Phage-Related Integrase; Hypothethical Protein Phage Integrase Domain; Integrase/Recombinase Protein; Integrase Prophage; Integrase Protein; Shufflon-Specific Recombinase; Integrase Partial Gene; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGIADTMPALIDDWLLVKLPKYA
LKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHFSTKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEE
KARDRYITDMELEAVRAAALVGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL
IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAAKGTEPDPRFLVGMHFHDLRA
KALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVTPVPMRRTS

Sequences:

>Translated_368_residues
MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGIADTMPALIDDWLLVKLPKYA
LKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHFSTKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEE
KARDRYITDMELEAVRAAALVGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL
IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAAKGTEPDPRFLVGMHFHDLRA
KALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVTPVPMRRTS
>Mature_368_residues
MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGIADTMPALIDDWLLVKLPKYA
LKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHFSTKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEE
KARDRYITDMELEAVRAAALVGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL
IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAAKGTEPDPRFLVGMHFHDLRA
KALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVTPVPMRRTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41432; Mature: 41432

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGI
CCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCC
ADTMPALIDDWLLVKLPKYALKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
STKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEEKARDRYITDMELEAVRAAAL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
VGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCEEE
IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAA
EEECCCHHHHHHHHHCCCEEECCCEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC
KGTEPDPRFLVGMHFHDLRAKALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVT
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PVPMRRTS
CCCCCCCC
>Mature Secondary Structure
MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGI
CCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCC
ADTMPALIDDWLLVKLPKYALKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
STKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEEKARDRYITDMELEAVRAAAL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
VGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCEEE
IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAA
EEECCCHHHHHHHHHCCCEEECCCEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC
KGTEPDPRFLVGMHFHDLRAKALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVT
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PVPMRRTS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA