| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027644
Identifier: 238027644
GI number: 238027644
Start: 2254644
End: 2255183
Strand: Reverse
Name: 238027644
Synonym: bglu_1g20650
Alternate gene names: NA
Gene position: 2255183-2254644 (Counterclockwise)
Preceding gene: 238027658
Following gene: 238027643
Centisome position: 57.73
GC content: 60.37
Gene sequence:
>540_bases ATGGCGCTGGTGAAATGTGGGGAGTGCGGAGCAGAGATAAGCGACAAGGCGGACGCGTGCGTGCGCTGCGGCGCTCCGAT CAAGAAAAATCTCTCGAAGCGGGCCGCCTGGATCACGGCTGGAGTTGTCGTCGTGTGCGGCGTGGCTGCTTACCTTGCGG TGACCGCGCCGAAGCAGGAGGGCGGAGCACCGCCGGCAGCGGCGGAGAGGTCAGGCACGAAGGAAAGCGCTTCGGACTGC GCCAAGACCGATCTGCAGTGCCTTGGCGACAAGGGCATAGTCGGCGCCAGCGTGTACTGTAAAAATCCAGTCACCAAACT TGCTAAGTACGACGTCAAGTGGACTGACCGAACCTTCGAGCTGAAATTCAGCCGATTCCGTTGGGCCGATCAGGCCGCCG GAGTGATCACGTATGTGGGCGACAAGGCCTTATTCCAGAACGGATTCGGCGCTTACACCCCAGTCATATACGAGTGTGAT CTGGCGGCCGACAACAAAACCGTGCTCGATGTGCGGGTGAAAGAAGGGCGTCTGCCCTGA
Upstream 100 bases:
>100_bases AAAATTTGTAACAGCCGATCGACAGCACAAGGCGCAGCGTTGGCCTGAAATAGACGGTTCGGTATGCTTCCTGGACAACG AAACTCGACGGGGTGGCCGG
Downstream 100 bases:
>100_bases CGAACGGGGCTGGAGGACGAGCGGCTCACGCAAGCCTTTTACCGATGTTGCGGTGCTGAATCCGGTTGAACCGGGTTTCG AAACGCGGCAAACTACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MALVKCGECGAEISDKADACVRCGAPIKKNLSKRAAWITAGVVVVCGVAAYLAVTAPKQEGGAPPAAAERSGTKESASDC AKTDLQCLGDKGIVGASVYCKNPVTKLAKYDVKWTDRTFELKFSRFRWADQAAGVITYVGDKALFQNGFGAYTPVIYECD LAADNKTVLDVRVKEGRLP
Sequences:
>Translated_179_residues MALVKCGECGAEISDKADACVRCGAPIKKNLSKRAAWITAGVVVVCGVAAYLAVTAPKQEGGAPPAAAERSGTKESASDC AKTDLQCLGDKGIVGASVYCKNPVTKLAKYDVKWTDRTFELKFSRFRWADQAAGVITYVGDKALFQNGFGAYTPVIYECD LAADNKTVLDVRVKEGRLP >Mature_178_residues ALVKCGECGAEISDKADACVRCGAPIKKNLSKRAAWITAGVVVVCGVAAYLAVTAPKQEGGAPPAAAERSGTKESASDCA KTDLQCLGDKGIVGASVYCKNPVTKLAKYDVKWTDRTFELKFSRFRWADQAAGVITYVGDKALFQNGFGAYTPVIYECDL AADNKTVLDVRVKEGRLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19003; Mature: 18872
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVKCGECGAEISDKADACVRCGAPIKKNLSKRAAWITAGVVVVCGVAAYLAVTAPKQE CCEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHC GGAPPAAAERSGTKESASDCAKTDLQCLGDKGIVGASVYCKNPVTKLAKYDVKWTDRTFE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCEECCCEEE LKFSRFRWADQAAGVITYVGDKALFQNGFGAYTPVIYECDLAADNKTVLDVRVKEGRLP EEHHHHCCCHHHCCEEEEECCHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCC >Mature Secondary Structure ALVKCGECGAEISDKADACVRCGAPIKKNLSKRAAWITAGVVVVCGVAAYLAVTAPKQE CEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHC GGAPPAAAERSGTKESASDCAKTDLQCLGDKGIVGASVYCKNPVTKLAKYDVKWTDRTFE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCEECCCEEE LKFSRFRWADQAAGVITYVGDKALFQNGFGAYTPVIYECDLAADNKTVLDVRVKEGRLP EEHHHHCCCHHHCCEEEEECCHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA