Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027566
Identifier: 238027566
GI number: 238027566
Start: 2169244
End: 2169441
Strand: Reverse
Name: 238027566
Synonym: bglu_1g19840
Alternate gene names: NA
Gene position: 2169441-2169244 (Counterclockwise)
Preceding gene: 238027567
Following gene: 238027565
Centisome position: 55.53
GC content: 62.63
Gene sequence:
>198_bases ATGAACGCACTCATCAATCGCTTCCTCAAGGAAGAAGACGGGGTTACCGCTGTCGAATACGGTCTCATCGCGGGCCTGAT GGCAGTGGCACTCGTCGCGGCCGTCGGCGTCCTGTCGGGCGGCATTTCCAACGCATTCAGCTATATCGCCGGCAAGCTCA CCGGGCTTGGCGCCGCCACCGGCGGCTCGAGCAGCTAA
Upstream 100 bases:
>100_bases TAAAGAAGTGATCGGATCCGGACGTCGAAGCCGGTGACGGTTGGACGGTCAAACATGCCAAGTGCATCAGGCCCACGAAA CTCAAGGCACGAGGATTAAC
Downstream 100 bases:
>100_bases CCCGATCCTGCTGTTCCGCATGCGGATGCGCGGGTCGCCGGTTCGGCGCCCGCATTTGCCGTGCCCGCCTTTCGAGAATC GGAATGATTCTGATTTTGAG
Product: Flp/Fap pilin component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAATGGSSS
Sequences:
>Translated_65_residues MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAATGGSSS >Mature_65_residues MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAATGGSSS
Specific function: Unknown
COG id: COG3847
COG function: function code U; Flp pilus assembly protein, pilin Flp
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6346; Mature: 6346
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAAT CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC GGSSS CCCCC >Mature Secondary Structure MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAAT CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC GGSSS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA