Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yulF [H]

Identifier: 238027539

GI number: 238027539

Start: 2136739

End: 2137740

Strand: Reverse

Name: yulF [H]

Synonym: bglu_1g19570

Alternate gene names: 238027539

Gene position: 2137740-2136739 (Counterclockwise)

Preceding gene: 238027540

Following gene: 238027532

Centisome position: 54.72

GC content: 72.36

Gene sequence:

>1002_bases
ATGACCCTTCCTTCCTCCCAGCCGATCCGTTTCGGCATCGTCGGCGCCGGCGCGATCGCGCGCCGCTTCGCGCAATCGCT
GGGCCACGTGCCGGATGCCGTGCTCGCGCAGGTCTGGGCGCGCCGCCCGGAGGCCGCCGCCGCGTTCTGCGCCGAGCTAG
GCGGCACGCCCGCAGCGAGCTTCGAGGCGCTGTGCGCATCCGATCTGGATGCGATCTACATCGCCACCCTGAACGACAGC
CACGCCCGTTATGCGATCGCCGCGCTCGCGGCCGGCAAGGCCGTGCTCTGCGAGAAGCCGGCCACCGTCAATGCGCGCGA
ACTCGAGGCCGTGCTGGCCGCCGCCGCGGCGGCCCGGAGGCTGTTCATGGAGGCCATGAAGCCGCCGTTCTATCCGCTCT
ACCGGCGCCTGCGCGAGCATCTGGCGCGCGACCCGATCGGCGCGGTCCGGCTGGTGCGGGCGGGCGGTGCGTTCTCGACG
GTGCCGGCCGATCATCCGAGCTTCAGCGCCGCGGCGGCGGGCGGCGCGCTGCTCGACATCGGCATCTACGAGCTGTTTCT
CGCCGTCGACTGGCTCGGCGAGGCGCACGAGGTGCAGACGCTCGGCCGGGTCGGCGCGAGCGGCGTGGACGTGTTCGCCA
GCCTGAACAGCCGTCACGCCGAAGGCGGCATTGCGCAGCTGTTCTGCGGGCTCGACGTGATGGGGCGCGGCGACGCGCTG
CTCGGCGCGGCGGGCGGGACCGTGACGATCCACGAGAACTGGTGGAATCCGGCCAAGGCGACGATCCGTTACGCGGACGG
CCGCGTCGTCGAGCTGGACGCGCCGTTTTCGGGCGGCGGCCTCAACTACGAGACCGAGCATTTCTGCGCGCTGCTGCGCG
AAGGGCGGCTCGAGAGTCCGGTGATGACGCACGCGCATTCGCGCCACATGATCGCGCTGTGCGATGCGGCGCGCGCGGCG
CTCGGCGTGAGGTTCGCGGCGGACGACGCGAGCGCGGGCTGA

Upstream 100 bases:

>100_bases
TGCACGCGCTAGCCGGCGGGACATCGACCCGCGCCGGCCGTTATCATGACGGCCGGCCGCCGGCTTGGCCGGCGCGGTTT
CCCGCCCCACTTCGATCCCG

Downstream 100 bases:

>100_bases
GGGCCGGACGCCCAGCGCGACGCGCTCGGGCATCGCCGGAGGGCGCGTGGGCCTCGCGTCGGCGCGCGGGCCCGGCCCGC
AGCCGGGCGCCGGCCGGCCT

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTLPSSQPIRFGIVGAGAIARRFAQSLGHVPDAVLAQVWARRPEAAAAFCAELGGTPAASFEALCASDLDAIYIATLNDS
HARYAIAALAAGKAVLCEKPATVNARELEAVLAAAAAARRLFMEAMKPPFYPLYRRLREHLARDPIGAVRLVRAGGAFST
VPADHPSFSAAAAGGALLDIGIYELFLAVDWLGEAHEVQTLGRVGASGVDVFASLNSRHAEGGIAQLFCGLDVMGRGDAL
LGAAGGTVTIHENWWNPAKATIRYADGRVVELDAPFSGGGLNYETEHFCALLREGRLESPVMTHAHSRHMIALCDAARAA
LGVRFAADDASAG

Sequences:

>Translated_333_residues
MTLPSSQPIRFGIVGAGAIARRFAQSLGHVPDAVLAQVWARRPEAAAAFCAELGGTPAASFEALCASDLDAIYIATLNDS
HARYAIAALAAGKAVLCEKPATVNARELEAVLAAAAAARRLFMEAMKPPFYPLYRRLREHLARDPIGAVRLVRAGGAFST
VPADHPSFSAAAAGGALLDIGIYELFLAVDWLGEAHEVQTLGRVGASGVDVFASLNSRHAEGGIAQLFCGLDVMGRGDAL
LGAAGGTVTIHENWWNPAKATIRYADGRVVELDAPFSGGGLNYETEHFCALLREGRLESPVMTHAHSRHMIALCDAARAA
LGVRFAADDASAG
>Mature_332_residues
TLPSSQPIRFGIVGAGAIARRFAQSLGHVPDAVLAQVWARRPEAAAAFCAELGGTPAASFEALCASDLDAIYIATLNDSH
ARYAIAALAAGKAVLCEKPATVNARELEAVLAAAAAARRLFMEAMKPPFYPLYRRLREHLARDPIGAVRLVRAGGAFSTV
PADHPSFSAAAAGGALLDIGIYELFLAVDWLGEAHEVQTLGRVGASGVDVFASLNSRHAEGGIAQLFCGLDVMGRGDALL
GAAGGTVTIHENWWNPAKATIRYADGRVVELDAPFSGGGLNYETEHFCALLREGRLESPVMTHAHSRHMIALCDAARAAL
GVRFAADDASAG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=334, Percent_Identity=32.0359281437126, Blast_Score=126, Evalue=4e-29,
Organism=Escherichia coli, GI145693182, Length=329, Percent_Identity=27.9635258358663, Blast_Score=95, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24581117, Length=339, Percent_Identity=30.6784660766962, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24581115, Length=346, Percent_Identity=26.878612716763, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24584727, Length=332, Percent_Identity=25.6024096385542, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34881; Mature: 34750

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPSSQPIRFGIVGAGAIARRFAQSLGHVPDAVLAQVWARRPEAAAAFCAELGGTPAAS
CCCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHH
FEALCASDLDAIYIATLNDSHARYAIAALAAGKAVLCEKPATVNARELEAVLAAAAAARR
HHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LFMEAMKPPFYPLYRRLREHLARDPIGAVRLVRAGGAFSTVPADHPSFSAAAAGGALLDI
HHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHH
GIYELFLAVDWLGEAHEVQTLGRVGASGVDVFASLNSRHAEGGIAQLFCGLDVMGRGDAL
HHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEE
LGAAGGTVTIHENWWNPAKATIRYADGRVVELDAPFSGGGLNYETEHFCALLREGRLESP
EECCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
VMTHAHSRHMIALCDAARAALGVRFAADDASAG
HHHHCCCCCEEEHHHHHHHHHCEEEECCCCCCC
>Mature Secondary Structure 
TLPSSQPIRFGIVGAGAIARRFAQSLGHVPDAVLAQVWARRPEAAAAFCAELGGTPAAS
CCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHH
FEALCASDLDAIYIATLNDSHARYAIAALAAGKAVLCEKPATVNARELEAVLAAAAAARR
HHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LFMEAMKPPFYPLYRRLREHLARDPIGAVRLVRAGGAFSTVPADHPSFSAAAAGGALLDI
HHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHH
GIYELFLAVDWLGEAHEVQTLGRVGASGVDVFASLNSRHAEGGIAQLFCGLDVMGRGDAL
HHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEE
LGAAGGTVTIHENWWNPAKATIRYADGRVVELDAPFSGGGLNYETEHFCALLREGRLESP
EECCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
VMTHAHSRHMIALCDAARAALGVRFAADDASAG
HHHHCCCCCEEEHHHHHHHHHCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]