Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027532
Identifier: 238027532
GI number: 238027532
Start: 2130546
End: 2130986
Strand: Reverse
Name: 238027532
Synonym: bglu_1g19500
Alternate gene names: NA
Gene position: 2130986-2130546 (Counterclockwise)
Preceding gene: 238027539
Following gene: 238027531
Centisome position: 54.55
GC content: 57.82
Gene sequence:
>441_bases ATGAATAAAATGACAAACGCCTACAACTATTTGGGGCACCCGGACCTCACACCGGCCGAGTTGTTTTTCTTCATCGCAGC GCAGGAAACCTGCGAGCAGGTCGGAATCGATGACATCGAAGGCGTGATCCTGATTCTGTCCGGCTGGCCGCTCTTGCCGA CGCGCGGGAAGTTCGCCGGCGCTACCAAGGGCACGTCCGTCGCGTCGGTCATGGCGCGTTCGGTTTTCCGGTTCCAGTTC AAGCGTCGAGTTTTGCCAACGCTAACCCTTGAAAGCATCAAATCGTTTCGGGTCATCCTTACCCGGAAGTTGAGCGTCTT CGTCGGGCGCGCTGTCCCAGGGCTCGGATGGGTGTTGCTTGCACGTGACGCGTTCATGATCGTGCGGAACACCGTTGCCA AATACAACGGGATGGTCAGGCCTGAGGATCGGGTGCTCTGA
Upstream 100 bases:
>100_bases GAATCCGTGGGCTACTTACCCAGCATGGCAGGTTCTGGTGGGTCCGCAACCCGCCTGGCAGGCGCCGTGCGCCTGCTAGA ATGGTTGACCGTGTTTTCGT
Downstream 100 bases:
>100_bases TGGCAGACGTATCTTGGGAAGCAATCGAGGCGTTTGTCCGGGCCGAGGTCGGGCTGGGTCCGTCGAAACCATTGACCCGT GATACACGGTTATGGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNKMTNAYNYLGHPDLTPAELFFFIAAQETCEQVGIDDIEGVILILSGWPLLPTRGKFAGATKGTSVASVMARSVFRFQF KRRVLPTLTLESIKSFRVILTRKLSVFVGRAVPGLGWVLLARDAFMIVRNTVAKYNGMVRPEDRVL
Sequences:
>Translated_146_residues MNKMTNAYNYLGHPDLTPAELFFFIAAQETCEQVGIDDIEGVILILSGWPLLPTRGKFAGATKGTSVASVMARSVFRFQF KRRVLPTLTLESIKSFRVILTRKLSVFVGRAVPGLGWVLLARDAFMIVRNTVAKYNGMVRPEDRVL >Mature_146_residues MNKMTNAYNYLGHPDLTPAELFFFIAAQETCEQVGIDDIEGVILILSGWPLLPTRGKFAGATKGTSVASVMARSVFRFQF KRRVLPTLTLESIKSFRVILTRKLSVFVGRAVPGLGWVLLARDAFMIVRNTVAKYNGMVRPEDRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16308; Mature: 16308
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMTNAYNYLGHPDLTPAELFFFIAAQETCEQVGIDDIEGVILILSGWPLLPTRGKFAG CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCC ATKGTSVASVMARSVFRFQFKRRVLPTLTLESIKSFRVILTRKLSVFVGRAVPGLGWVLL CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ARDAFMIVRNTVAKYNGMVRPEDRVL HHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNKMTNAYNYLGHPDLTPAELFFFIAAQETCEQVGIDDIEGVILILSGWPLLPTRGKFAG CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCC ATKGTSVASVMARSVFRFQFKRRVLPTLTLESIKSFRVILTRKLSVFVGRAVPGLGWVLL CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ARDAFMIVRNTVAKYNGMVRPEDRVL HHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA