Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027531
Identifier: 238027531
GI number: 238027531
Start: 2130205
End: 2130546
Strand: Reverse
Name: 238027531
Synonym: bglu_1g19490
Alternate gene names: NA
Gene position: 2130546-2130205 (Counterclockwise)
Preceding gene: 238027532
Following gene: 238027529
Centisome position: 54.54
GC content: 53.51
Gene sequence:
>342_bases ATGGCAGACGTATCTTGGGAAGCAATCGAGGCGTTTGTCCGGGCCGAGGTCGGGCTGGGTCCGTCGAAACCATTGACCCG TGATACACGGTTATGGGAAGACCTGGGCATGACCGGTGACGACGCCAACGATTTCATGGGGTGTTTTTTCGAAAGGTTTC AGATCGATCCCGGTGATTTCGATTTTCATCGCTACTTTCTGATGGAAGGTGAAGGCGGCCTGTATTCCCTGTTCCGGCGC TGGGTTTTGCGAAAACCCAAAACTCGACGAGAGCCAATAACACTTGGCATGCTCCATCTTGCGGCCCTTGACCGGAAATG GAGTTCTTTTGCCCGGTTGTGA
Upstream 100 bases:
>100_bases GGCTCGGATGGGTGTTGCTTGCACGTGACGCGTTCATGATCGTGCGGAACACCGTTGCCAAATACAACGGGATGGTCAGG CCTGAGGATCGGGTGCTCTG
Downstream 100 bases:
>100_bases GCGAGCAATCAAGCAGGTTCCCTGCAAAACGCAAGCCCCAGACGTGCCACGGCCCCCTGTTTGACAGGGGGCCGTGGTCT GCTACCTTGGGGTGGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MADVSWEAIEAFVRAEVGLGPSKPLTRDTRLWEDLGMTGDDANDFMGCFFERFQIDPGDFDFHRYFLMEGEGGLYSLFRR WVLRKPKTRREPITLGMLHLAALDRKWSSFARL
Sequences:
>Translated_113_residues MADVSWEAIEAFVRAEVGLGPSKPLTRDTRLWEDLGMTGDDANDFMGCFFERFQIDPGDFDFHRYFLMEGEGGLYSLFRR WVLRKPKTRREPITLGMLHLAALDRKWSSFARL >Mature_112_residues ADVSWEAIEAFVRAEVGLGPSKPLTRDTRLWEDLGMTGDDANDFMGCFFERFQIDPGDFDFHRYFLMEGEGGLYSLFRRW VLRKPKTRREPITLGMLHLAALDRKWSSFARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13180; Mature: 13049
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVSWEAIEAFVRAEVGLGPSKPLTRDTRLWEDLGMTGDDANDFMGCFFERFQIDPGDF CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC DFHRYFLMEGEGGLYSLFRRWVLRKPKTRREPITLGMLHLAALDRKWSSFARL CCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADVSWEAIEAFVRAEVGLGPSKPLTRDTRLWEDLGMTGDDANDFMGCFFERFQIDPGDF CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC DFHRYFLMEGEGGLYSLFRRWVLRKPKTRREPITLGMLHLAALDRKWSSFARL CCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA