Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027529

Identifier: 238027529

GI number: 238027529

Start: 2126410

End: 2126901

Strand: Reverse

Name: 238027529

Synonym: bglu_1g19460

Alternate gene names: NA

Gene position: 2126901-2126410 (Counterclockwise)

Preceding gene: 238027531

Following gene: 238027528

Centisome position: 54.45

GC content: 76.63

Gene sequence:

>492_bases
ATGGACCTCGCTCACGATCTGCCGTCGATCCTCGCTCAGGCATATCCGCCCGTGTTCCCGCGCGTCGATACCGGCCGCGC
CCGGGCGCTCGGCCTGCGGTCGCGCGAGGTGGCGGTGGCGCGCGGCCACGCCGTGGCGATCGACCTCGGCATCTTTGGCC
CGCCGCGCTTCCTTGCGGCGCTCGCCGGCCAGAGGCCGGACGAGCTCGCCCGGATCGGGCGCAGGCGCAACACGGTCGCG
CATTGTCGGCGCAGCTCGTATGCGATCGGCCTGCGCCTCGAGCGGGCCGGCTCCAGGCGCGCCGCGAGGCAGGCGCTGCC
GGCCGCCGGGCACGGCGGCGCGTTTTGCCCCGCCGTCGCGGGCGGGGGCGGCGCCGTCACGGTATCGCGCCTGCCGCAGC
GCGCCGCTCGCGAGCCGATGGCGGAAGCGCTCAGCGGGCAACCCGGTCGTGCCTGCGCGGCACTCGTGCTTGCCGGGGAG
CCCGCACGATGA

Upstream 100 bases:

>100_bases
GCGTCGGGCGAGGCACCGCTGGGCTAGAATCTTCCCGCCGCGGGCGCCCGCGGCTCGAACCCCGGCTTTGTGGGCCGCTT
CATCCGCTTCGACGATCTTC

Downstream 100 bases:

>100_bases
AGCTGCCCGCCTATGCCTGGCTCGCGATCGCGATCGTTGCCGAGGTGATCGGCACGTCCGCGCTGCGCGCGTCCGAAGGA
TTCACGCGGCTGATGCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDLAHDLPSILAQAYPPVFPRVDTGRARALGLRSREVAVARGHAVAIDLGIFGPPRFLAALAGQRPDELARIGRRRNTVA
HCRRSSYAIGLRLERAGSRRAARQALPAAGHGGAFCPAVAGGGGAVTVSRLPQRAAREPMAEALSGQPGRACAALVLAGE
PAR

Sequences:

>Translated_163_residues
MDLAHDLPSILAQAYPPVFPRVDTGRARALGLRSREVAVARGHAVAIDLGIFGPPRFLAALAGQRPDELARIGRRRNTVA
HCRRSSYAIGLRLERAGSRRAARQALPAAGHGGAFCPAVAGGGGAVTVSRLPQRAAREPMAEALSGQPGRACAALVLAGE
PAR
>Mature_163_residues
MDLAHDLPSILAQAYPPVFPRVDTGRARALGLRSREVAVARGHAVAIDLGIFGPPRFLAALAGQRPDELARIGRRRNTVA
HCRRSSYAIGLRLERAGSRRAARQALPAAGHGGAFCPAVAGGGGAVTVSRLPQRAAREPMAEALSGQPGRACAALVLAGE
PAR

Specific function: Unknown

COG id: COG4702

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0303 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005624
- InterPro:   IPR010371 [H]

Pfam domain/function: PF03928 DUF336 [H]

EC number: NA

Molecular weight: Translated: 16951; Mature: 16951

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLAHDLPSILAQAYPPVFPRVDTGRARALGLRSREVAVARGHAVAIDLGIFGPPRFLAA
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEECCCEEEEEECCCCCHHHHHH
LAGQRPDELARIGRRRNTVAHCRRSSYAIGLRLERAGSRRAARQALPAAGHGGAFCPAVA
HHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEC
GGGGAVTVSRLPQRAAREPMAEALSGQPGRACAALVLAGEPAR
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCC
>Mature Secondary Structure
MDLAHDLPSILAQAYPPVFPRVDTGRARALGLRSREVAVARGHAVAIDLGIFGPPRFLAA
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEECCCEEEEEECCCCCHHHHHH
LAGQRPDELARIGRRRNTVAHCRRSSYAIGLRLERAGSRRAARQALPAAGHGGAFCPAVA
HHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEC
GGGGAVTVSRLPQRAAREPMAEALSGQPGRACAALVLAGEPAR
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA