Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027520

Identifier: 238027520

GI number: 238027520

Start: 2119987

End: 2120313

Strand: Reverse

Name: 238027520

Synonym: bglu_1g19360

Alternate gene names: NA

Gene position: 2120313-2119987 (Counterclockwise)

Preceding gene: 238027521

Following gene: 238027519

Centisome position: 54.28

GC content: 61.77

Gene sequence:

>327_bases
ATGAACAAGAAGGCAACCAAGTTTTCCCCGGAAGTCCGGGGGCGCGCAGTGCGTCTGGTACGTGAGCAGCGTAGCGAACA
TCCGTCGATGTGGGCGGCGGTCGAATCGATTGCGCCGATGATCGGCTGTACGCCGCAGACGCTGCTGGATTGGGTCAAGC
GCGAGGAGATCGATCGTGGGGAACGTGATGGCGTGAGCACGGCCGAGCGTGAACGCATCAAGGCCCTGGAGCGTGAGGTC
AAGGAACTGCGCCGTACCAACGAGATTCTCAAGCTGGCGAGCGCGTTTTTCGCCCAGGCGGAGCTCGACCGCCGATTCAA
GTCCTGA

Upstream 100 bases:

>100_bases
CCCCCAAAATCCAGGGCGGATCGACTGTCTGGGATCGGCCAGGAGGCGCCTGAACCGCACCGAATTTTGTGGAGGCTCGG
ATTCTTGAGAGAATGGAGCC

Downstream 100 bases:

>100_bases
AAGCCTTCGTTGATCAGCATCGCGACACCTTCGGGGTCGAGCCGATCTGCAAGGTCTTGCGGATTGCCCCGTCGGGCTAC
CGACGCCATGCTGCGCGGCT

Product: transposase IS3/IS911

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV
KELRRTNEILKLASAFFAQAELDRRFKS

Sequences:

>Translated_108_residues
MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV
KELRRTNEILKLASAFFAQAELDRRFKS
>Mature_108_residues
MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV
KELRRTNEILKLASAFFAQAELDRRFKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 12541; Mature: 12541

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
ERDGVSTAERERIKALEREVKELRRTNEILKLASAFFAQAELDRRFKS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
ERDGVSTAERERIKALEREVKELRRTNEILKLASAFFAQAELDRRFKS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]