| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027520
Identifier: 238027520
GI number: 238027520
Start: 2119987
End: 2120313
Strand: Reverse
Name: 238027520
Synonym: bglu_1g19360
Alternate gene names: NA
Gene position: 2120313-2119987 (Counterclockwise)
Preceding gene: 238027521
Following gene: 238027519
Centisome position: 54.28
GC content: 61.77
Gene sequence:
>327_bases ATGAACAAGAAGGCAACCAAGTTTTCCCCGGAAGTCCGGGGGCGCGCAGTGCGTCTGGTACGTGAGCAGCGTAGCGAACA TCCGTCGATGTGGGCGGCGGTCGAATCGATTGCGCCGATGATCGGCTGTACGCCGCAGACGCTGCTGGATTGGGTCAAGC GCGAGGAGATCGATCGTGGGGAACGTGATGGCGTGAGCACGGCCGAGCGTGAACGCATCAAGGCCCTGGAGCGTGAGGTC AAGGAACTGCGCCGTACCAACGAGATTCTCAAGCTGGCGAGCGCGTTTTTCGCCCAGGCGGAGCTCGACCGCCGATTCAA GTCCTGA
Upstream 100 bases:
>100_bases CCCCCAAAATCCAGGGCGGATCGACTGTCTGGGATCGGCCAGGAGGCGCCTGAACCGCACCGAATTTTGTGGAGGCTCGG ATTCTTGAGAGAATGGAGCC
Downstream 100 bases:
>100_bases AAGCCTTCGTTGATCAGCATCGCGACACCTTCGGGGTCGAGCCGATCTGCAAGGTCTTGCGGATTGCCCCGTCGGGCTAC CGACGCCATGCTGCGCGGCT
Product: transposase IS3/IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV KELRRTNEILKLASAFFAQAELDRRFKS
Sequences:
>Translated_108_residues MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV KELRRTNEILKLASAFFAQAELDRRFKS >Mature_108_residues MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV KELRRTNEILKLASAFFAQAELDRRFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 12541; Mature: 12541
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRG CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ERDGVSTAERERIKALEREVKELRRTNEILKLASAFFAQAELDRRFKS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKKATKFSPEVRGRAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRG CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ERDGVSTAERERIKALEREVKELRRTNEILKLASAFFAQAELDRRFKS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]