Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027516

Identifier: 238027516

GI number: 238027516

Start: 2116334

End: 2117932

Strand: Reverse

Name: 238027516

Synonym: bglu_1g19310

Alternate gene names: NA

Gene position: 2117932-2116334 (Counterclockwise)

Preceding gene: 238027517

Following gene: 238027514

Centisome position: 54.22

GC content: 62.85

Gene sequence:

>1599_bases
ATGGTGAGCGGCATGGACGAACATGACTTCTCGCAATTGCCGTCGGCCGCTCAGGCCTATATCCGAGAACTGGAGGCGCG
CAACCGACAACTAGGCGAACGCATCGCCCAGTTGGAGGAGCAGTTCCGCTTGGCGCAGAGCAAACGCTTCGCACCGAGCA
GCGAGAAGCTGAAGGACCGCGTATTCGACGAGGCCGAGCAGATGGCTGCGGCAGCGCCATCGGAGGACCCCGACGACGAC
GCGTTCGCGTTGCCGGACACAGGGCTGCCCGCACCCGATGAGCCAGAGCGGGGCAAGCGAGGCCGCAAACCGTTGCCGGC
CGAGCTGCCGCGCCAGCGCATTGAATACGATCTACCCGACGATGAGAAGGTCTGCCCCTGCTGCCGCAGCGCGATGCATC
GCATGGGCGAAGAAGTCAGCGAGCAACTGCACTTCGAAGTGAAAGCCTCTGTGCTGCAGCACGTTCGCTTCAAGTACGCA
TGTCGCCACTGCGAGCGCAATGCCGAGAGCACGCCGATCGTGACCGCCCCGATGCCGGCGCAGCCGCTGCCGGGCAGCAA
TGCGAGCGCAGCGCTCATCGCCACCGTGACGGCGGGCAAATATGTCGATGGCACGCCGCTATACCGCATGGAGGATGCGC
TCTCGCGCGCGAACATCGCGGTGGGCCGCGGCACGCTGGCCAACTGGATCATCCGGCCCGCTCAACTGCACTACAGCCGA
CTGTACGAGGCCTTGCGCCAAACGCTGCTATCGCAACAGTTGATTCACGGCGACGAGACGACGGTGCAGGTTCTCAAAGA
ACCGGGCAAGACCGCGCAAAGCACCTCGTATATGTGGGTCTATCGCAGTGCCGAGCAATGCGAGCAGCCGGTGGTGCTGT
TCGACTACCAGCCAGGGCGCGGCCAAGAGTATCCGCAAGCGTTCCTGGCCGGATACACGGGCATGCTGATGAGTGACGGC
TACGCTGCGTGGCGCACGCTCGACGCAGCGACGCACTTGGGCTGCCTTGCCCACGCCCGTAGGGCGTTCGTCGATGCGCT
CAAAGGTCAGAAGAAGCCCGGTGGGCGTGCGGCACAGGCTCTTGAGTACTTCAAGGCGTTGTATCAGGTCGAGACGCTCG
CCAAGGGCGGTCTGCCCGAAGGAGAAACCCGCGACGATTACACGTACCGATTACGCCAGGAACATAGCGTGCCGTTGCTC
ACTGCATTCAAGACCTGGCTGGACGAGCAGGCGCCACACGTGTTGCCCGAAAGTCTGCTGGGCAAGGCGATCAGCTATAC
GCGCAATCAATGGGAGTATCTGAGCCGCTACGTCATCGACGGCCGCGCCCCAATCGACAATAACGTTATCGAACGCGACA
TCAGGCCCTTCTGCACAGGCCGCAAATCTTGGCTGTTCAGCGACACGGTCGCTGGCGCGAAGGCGAGCGCAATGGTCTAC
AGTCTCATGCTCACGTGCCGCGCATGCAACGTCGAGCCGTATGCCTACCTGCTTCATGTGCTCACCGAACTGCCTCAGCG
AGCCCCGGATGCCGACATCACGGACTTGCTGCCGTTCAACTTCGCGAAACGGCAAACGGCTACACCGCCGCCGCCTTGA

Upstream 100 bases:

>100_bases
TCATGCGAGTTGAAGGCGGCGCCAACTGATGTTGTCGGTAAACAACGCGCGCGACGGTTGTTGCCCATTTCCGTAAACCC
ACTGGGCGCGCCGCTCCGGT

Downstream 100 bases:

>100_bases
TCGATCGAGCGCATAGCTTCGGCCCGACCGTCAACGTGTGGCGAATTGAGCGCTTACGATAAAACTCCTGCAGGATGGTT
TTATGGAACCGCTCGCAGAT

Product: transposase IS66

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MVSGMDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDD
AFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYA
CRHCERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSR
LYEALRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDG
YAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLL
TAFKTWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVY
SLMLTCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP

Sequences:

>Translated_532_residues
MVSGMDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDD
AFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYA
CRHCERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSR
LYEALRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDG
YAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLL
TAFKTWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVY
SLMLTCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
>Mature_532_residues
MVSGMDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDD
AFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYA
CRHCERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSR
LYEALRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDG
YAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLL
TAFKTWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVY
SLMLTCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 59596; Mature: 59596

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSGMDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDR
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VFDEAEQMAAAAPSEDPDDDAFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPD
HHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCCCCC
DEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHCERNAESTPIVTAPMPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
QPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSR
CCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LYEALRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGR
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCEEEEECCCCC
GQEYPQAFLAGYTGMLMSDGYAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFKTWLDEQAPHVLPESLL
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHH
GKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVY
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCEEEHHHHCCCHHHHHHH
SLMLTCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MVSGMDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDR
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VFDEAEQMAAAAPSEDPDDDAFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPD
HHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCCCCC
DEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHCERNAESTPIVTAPMPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
QPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSR
CCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LYEALRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGR
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCEEEEECCCCC
GQEYPQAFLAGYTGMLMSDGYAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFKTWLDEQAPHVLPESLL
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHH
GKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVY
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCEEEHHHHCCCHHHHHHH
SLMLTCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]