Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027514
Identifier: 238027514
GI number: 238027514
Start: 2112973
End: 2113857
Strand: Reverse
Name: 238027514
Synonym: bglu_1g19280
Alternate gene names: NA
Gene position: 2113857-2112973 (Counterclockwise)
Preceding gene: 238027516
Following gene: 238027513
Centisome position: 54.11
GC content: 54.35
Gene sequence:
>885_bases ATGAGCTCGCTGCTCCATCCCTTCGATCTTACGGAAGAACATGTTAATCAAATGCGAACCGAGGGAGCTTTGGTTCTTAG GCAGCTTTTTACTCCCACGGCTCTGAGTGCCTTGGATGAGGCAGCGTCCAATTTGACCGTACCGCCTGATCAGGAGCGTA GGCGAAGGTTTCGGCGGCTTGCATACGGTGATGGCGCTCCGGCGGCAATCGTGCAAACGCTGTGCCAGACCAGCAACTTC AGTTCTCTTCTTGGTCGGCTCATCGGGAAGGAGCAGGTGATCACCAACCTCGTTTCTTTCGAACTCGCTCCAGGAATGAA TGGAGAGCCTTGGCACTTCGGACGCCGTAGCTTTTGCTTCATCGGCCCTGAGGTACCGGCCTACACGCTCTGGATTCCCC TTACAAACATCAGGGAACGAGAAGAGGGCGGGGGGCTGGCGTGGGTGCCTGAAAACGTATTCAGTGCCTATAGTCGCGTC CAGCAATGGAGCTTTCTTTTTCGTATGTTAGGCGAGGGCGAGCCCGACTTGGCACTGGCGCGTGCGCTCGCCAAGCAATT CGGAACGGACGGGGATCCATGGGTGGGACCATTTGACCTTCTGGTTCTAGAGGCACGGAAGCTCGAGCAGGACTTTGCTC CAGGGGATGCGTTGATCTTCTCCCGCAATGTTTGGCATCGAACCTCCCCCCTGCTGTCACCCACGCTCGCGAATCGCAAG GCTGTTGTCATGCGATTCGTGGACGGGCGTGCGAAACTCGACAAGAAGATTATTTCCGGTTTTTCTAGAACGCTGCGACC CAAAGTAGACAATTTTCTTTCTTTTTTGTTGGATTCAGACGATTCTCTTCCTATCGGTGAACAGGAATTTTCGCTACACT TCTGA
Upstream 100 bases:
>100_bases GTGTATCAGTGAAAAATTGTATCCAAACATAATTAGCTCATCTACACTAGTATGTCTCCCTGCCTAGGGGCATGCCGCAT GCAGATTATGGAGGTTTTGA
Downstream 100 bases:
>100_bases GTGCCCTGATGACTTCCGGATCAACATCGAATTACGCGGAGGCATGCCTTGCCATTTCCCCCTGATTCCGAGACCGAAAG AGAAAGCCGGCACGACCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSSLLHPFDLTEEHVNQMRTEGALVLRQLFTPTALSALDEAASNLTVPPDQERRRRFRRLAYGDGAPAAIVQTLCQTSNF SSLLGRLIGKEQVITNLVSFELAPGMNGEPWHFGRRSFCFIGPEVPAYTLWIPLTNIREREEGGGLAWVPENVFSAYSRV QQWSFLFRMLGEGEPDLALARALAKQFGTDGDPWVGPFDLLVLEARKLEQDFAPGDALIFSRNVWHRTSPLLSPTLANRK AVVMRFVDGRAKLDKKIISGFSRTLRPKVDNFLSFLLDSDDSLPIGEQEFSLHF
Sequences:
>Translated_294_residues MSSLLHPFDLTEEHVNQMRTEGALVLRQLFTPTALSALDEAASNLTVPPDQERRRRFRRLAYGDGAPAAIVQTLCQTSNF SSLLGRLIGKEQVITNLVSFELAPGMNGEPWHFGRRSFCFIGPEVPAYTLWIPLTNIREREEGGGLAWVPENVFSAYSRV QQWSFLFRMLGEGEPDLALARALAKQFGTDGDPWVGPFDLLVLEARKLEQDFAPGDALIFSRNVWHRTSPLLSPTLANRK AVVMRFVDGRAKLDKKIISGFSRTLRPKVDNFLSFLLDSDDSLPIGEQEFSLHF >Mature_293_residues SSLLHPFDLTEEHVNQMRTEGALVLRQLFTPTALSALDEAASNLTVPPDQERRRRFRRLAYGDGAPAAIVQTLCQTSNFS SLLGRLIGKEQVITNLVSFELAPGMNGEPWHFGRRSFCFIGPEVPAYTLWIPLTNIREREEGGGLAWVPENVFSAYSRVQ QWSFLFRMLGEGEPDLALARALAKQFGTDGDPWVGPFDLLVLEARKLEQDFAPGDALIFSRNVWHRTSPLLSPTLANRKA VVMRFVDGRAKLDKKIISGFSRTLRPKVDNFLSFLLDSDDSLPIGEQEFSLHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33035; Mature: 32904
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLHPFDLTEEHVNQMRTEGALVLRQLFTPTALSALDEAASNLTVPPDQERRRRFRRL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AYGDGAPAAIVQTLCQTSNFSSLLGRLIGKEQVITNLVSFELAPGMNGEPWHFGRRSFCF HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE IGPEVPAYTLWIPLTNIREREEGGGLAWVPENVFSAYSRVQQWSFLFRMLGEGEPDLALA ECCCCCEEEEEEECCCHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RALAKQFGTDGDPWVGPFDLLVLEARKLEQDFAPGDALIFSRNVWHRTSPLLSPTLANRK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCHHHCCCC AVVMRFVDGRAKLDKKIISGFSRTLRPKVDNFLSFLLDSDDSLPIGEQEFSLHF EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSLLHPFDLTEEHVNQMRTEGALVLRQLFTPTALSALDEAASNLTVPPDQERRRRFRRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AYGDGAPAAIVQTLCQTSNFSSLLGRLIGKEQVITNLVSFELAPGMNGEPWHFGRRSFCF HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE IGPEVPAYTLWIPLTNIREREEGGGLAWVPENVFSAYSRVQQWSFLFRMLGEGEPDLALA ECCCCCEEEEEEECCCHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RALAKQFGTDGDPWVGPFDLLVLEARKLEQDFAPGDALIFSRNVWHRTSPLLSPTLANRK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCHHHCCCC AVVMRFVDGRAKLDKKIISGFSRTLRPKVDNFLSFLLDSDDSLPIGEQEFSLHF EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA