| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027491
Identifier: 238027491
GI number: 238027491
Start: 2082456
End: 2083409
Strand: Reverse
Name: 238027491
Synonym: bglu_1g19040
Alternate gene names: NA
Gene position: 2083409-2082456 (Counterclockwise)
Preceding gene: 238027492
Following gene: 238027490
Centisome position: 53.33
GC content: 55.56
Gene sequence:
>954_bases ATGGCAATAACGAAATGTGGCGAGCTGTCTGAACAGGCTTTTATCTCACGCTATCTGACGACCAATCAGCCTGTCATCGT CGCCGGCGAGATGGACACATGGGGCATTTACCAGGAGCCAGCGCTTCAGTATTTTGCGACCAAATGCGGCGACGAGCAGG TCCAGGTTTATGACAACCTGTTCGGCCTAATCGACGTTTGTAGCTTGCGCGCTTACTTGCTCGCAAGCGAGGAAAACCAG GACGCAGGCTCACTTCCTGGTTACGTGAGATGGTACGCCCAGTTCAGGGATGTCGATTTCGTCTGGTCGGATCCGGCGTT TAGCATGATCGAGCGAGAATGGACGCATCCGTCATTTTTACCGAAATCGTCGTACTGTCTGCCGCCTTCAAGGAAAGGCC AGGAAATCGATGTCACGCGAGATGCATTCCCATACAAGGGAATTTTTATTAGTTTCGCAGGCTGCCGTACCCGGCTGCAT CGTGACCCGATAGGAACGCAGGCGATCATTTGCCAGCTGCAGGGCACCAAGCGAGTCACGCTTTATTCGCCCGACGCGGC ATCGAAGCTCGAGTGCGATGGCGCCTTCTTCGATCCGATGAACCCGGACAAGCAGATGTTTCCGATGGGCGAACATGCGC GCCCCGAAGGCGAGATCGTGCTCCAGCCCGGAGAGATTCTCTTCATACCGGACGGCTGGTATCACGATGTCCTGACGCTC ACTGCGAGCGTGTCGATCACGTGGAATTTTGTCCATTCAGCTCGGATCCGGGGTTTTATCAATGGGCTAAAAGGCCAGCT TACCGCCCCCGAGGCAAGCATGGTTCGATATTTCTTCAAAGGCGTTGACGCCGGCCATCTCGACGAGATGGAGACCGGAC TGCGCCGAGCGTTGCACCGCGCAAACGTGCTTTCCGACACCCTTCAGAAGGGCTCAACCGAAGGAACGACATGA
Upstream 100 bases:
>100_bases ATAAGCGCCAAGGCAGGCCTTTGAAGCAATCGTGACCGATGGCCGCCAGTAAGATGAACGTGACGCCTCGAGTTCGGCCC GGCGGCGTCGGGAGAGACCG
Downstream 100 bases:
>100_bases CACCTCCACCCTCGAGCGACACGATCGCGACGTTCTGGCGGCGCATTCTGGCCGTCGACACACTGGCCGAGACCGACAAC ATACTCGCTAAAGGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MAITKCGELSEQAFISRYLTTNQPVIVAGEMDTWGIYQEPALQYFATKCGDEQVQVYDNLFGLIDVCSLRAYLLASEENQ DAGSLPGYVRWYAQFRDVDFVWSDPAFSMIEREWTHPSFLPKSSYCLPPSRKGQEIDVTRDAFPYKGIFISFAGCRTRLH RDPIGTQAIICQLQGTKRVTLYSPDAASKLECDGAFFDPMNPDKQMFPMGEHARPEGEIVLQPGEILFIPDGWYHDVLTL TASVSITWNFVHSARIRGFINGLKGQLTAPEASMVRYFFKGVDAGHLDEMETGLRRALHRANVLSDTLQKGSTEGTT
Sequences:
>Translated_317_residues MAITKCGELSEQAFISRYLTTNQPVIVAGEMDTWGIYQEPALQYFATKCGDEQVQVYDNLFGLIDVCSLRAYLLASEENQ DAGSLPGYVRWYAQFRDVDFVWSDPAFSMIEREWTHPSFLPKSSYCLPPSRKGQEIDVTRDAFPYKGIFISFAGCRTRLH RDPIGTQAIICQLQGTKRVTLYSPDAASKLECDGAFFDPMNPDKQMFPMGEHARPEGEIVLQPGEILFIPDGWYHDVLTL TASVSITWNFVHSARIRGFINGLKGQLTAPEASMVRYFFKGVDAGHLDEMETGLRRALHRANVLSDTLQKGSTEGTT >Mature_316_residues AITKCGELSEQAFISRYLTTNQPVIVAGEMDTWGIYQEPALQYFATKCGDEQVQVYDNLFGLIDVCSLRAYLLASEENQD AGSLPGYVRWYAQFRDVDFVWSDPAFSMIEREWTHPSFLPKSSYCLPPSRKGQEIDVTRDAFPYKGIFISFAGCRTRLHR DPIGTQAIICQLQGTKRVTLYSPDAASKLECDGAFFDPMNPDKQMFPMGEHARPEGEIVLQPGEILFIPDGWYHDVLTLT ASVSITWNFVHSARIRGFINGLKGQLTAPEASMVRYFFKGVDAGHLDEMETGLRRALHRANVLSDTLQKGSTEGTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI125988389, Length=259, Percent_Identity=22.3938223938224, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI125988395, Length=259, Percent_Identity=22.3938223938224, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35608; Mature: 35477
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITKCGELSEQAFISRYLTTNQPVIVAGEMDTWGIYQEPALQYFATKCGDEQVQVYDNL CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH FGLIDVCSLRAYLLASEENQDAGSLPGYVRWYAQFRDVDFVWSDPAFSMIEREWTHPSFL HHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCC PKSSYCLPPSRKGQEIDVTRDAFPYKGIFISFAGCRTRLHRDPIGTQAIICQLQGTKRVT CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCEEEEEEECCCEEEE LYSPDAASKLECDGAFFDPMNPDKQMFPMGEHARPEGEIVLQPGEILFIPDGWYHDVLTL EECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCHHHHEEE TASVSITWNFVHSARIRGFINGLKGQLTAPEASMVRYFFKGVDAGHLDEMETGLRRALHR EEEEEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ANVLSDTLQKGSTEGTT HHHHHHHHHCCCCCCCC >Mature Secondary Structure AITKCGELSEQAFISRYLTTNQPVIVAGEMDTWGIYQEPALQYFATKCGDEQVQVYDNL CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH FGLIDVCSLRAYLLASEENQDAGSLPGYVRWYAQFRDVDFVWSDPAFSMIEREWTHPSFL HHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCC PKSSYCLPPSRKGQEIDVTRDAFPYKGIFISFAGCRTRLHRDPIGTQAIICQLQGTKRVT CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCEEEEEEECCCEEEE LYSPDAASKLECDGAFFDPMNPDKQMFPMGEHARPEGEIVLQPGEILFIPDGWYHDVLTL EECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCHHHHEEE TASVSITWNFVHSARIRGFINGLKGQLTAPEASMVRYFFKGVDAGHLDEMETGLRRALHR EEEEEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ANVLSDTLQKGSTEGTT HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA