| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dmfA2 [H]
Identifier: 238027492
GI number: 238027492
Start: 2083475
End: 2085748
Strand: Reverse
Name: dmfA2 [H]
Synonym: bglu_1g19050
Alternate gene names: 238027492
Gene position: 2085748-2083475 (Counterclockwise)
Preceding gene: 238027493
Following gene: 238027491
Centisome position: 53.39
GC content: 60.07
Gene sequence:
>2274_bases ATGAGCGCGATCATCGCTTATTCGGATCGTTGGAGCGTGGCGCCGGGTGAGACGATTCGCTTCATGGTGAGCAGCGCGAA TGCTGAACCGTATGATGTACAAATTGTCCGGCTGCGTCAGCCGAACGCCGGCCCGGGGGCTTCCTCCTTCGAACCGGAGT GTGTTGCAACTCCTTGTAACGGTCGTTATGAGGGCCGCACTCAGACAATTCCGATCGGTTCACTGGCCGTTTTCGATCGT CTCGCCCTGGACGTTAGCGACGGGTTTTCGTTGACCGCGTGCATCCGCCCGACGACACCGCGCAAGGGCCGTCAGGCGAT CATGGGCGCGTGGTCTGAACACCAAATGACTGGCAGTGGGCTGGAATTAGATGAGCGCGGCGCGTTGCAGCTTGTGTTGG GGCGGCCCGGACTGGCGCCGGTGTATGTGTCCACCGGTGTGCCGATGACTCCACGCTGGCATCGCGTTGCGGCATCGTTC GACGCCGCGGCGGGTGCCGTGACACTGTGGCAAGAGCCGTTGAGCCGTCATGATTTCCATAATGAAGCGCCAGTGTCGGT GACGGTCAACGTGCCGTTCTGCCCAGCTGCGTTCGCCGGACCGTTCACGATGGCTGCGTGGAGCGCGGATCGCACGGACG AACCGTCCGCGTGGGAAGGCTGGCAGTTCGCCTGTCATTTCAACGGTTGTATTGCGCGACCACGCGTCGCACGTGGGCCG CTTGCGCGTGATGAAATCGCCCTGTTGGATGCGTGGCCGGAACGCGCCGATCTGGGGGAGCGTGTGGTGGCGGCGTGGGA CTTCACTCAGGGAATATCGGGCGACGCGGTTACCGATCTCGGGTTGCGGCAGCACCACGGGATATTGATCAATCAACCGA CCCGCGCCGTGCCTGGACACGATTGGGAAGGCGAAGTGTTCGCGTGGCCGCTTGCCCCAGATCGCTATGGTGCGATTCAT TTTCACGACGATGATCTGGTCGACGCTTGCTGGGCGTCAGATTTCGAATGGGTCGTGCCAAACGCATTACGATCGGGCGT ATATGCGGCGCATCTTACCAGTGATGTGAGCGAATTCTGGATACCGTTTGTCGTACGGCCACCGCGCGGCAAATCGAACA AGTCGACTGCACGTATTCTGCTGTTGCTCCCGACCGCCACCTATATCGCCTACCAGAATCATCGCACTCGTTTTTCCTCG CTTGCGAGCGAGCGTCTGCATGGTTGTCTGTCGCTGCTCGACGCCGTTGACGTCGCATTCCTAGATACGCCAGAAATGGG GCTGTCGACTTACGATCGCCATAGCGATGGAAGTGGGGTCGCTTACGCAAGCCGGCACCGACCGGCACAGAACGTCCGGC CGGACGGCCGCTTGTGGAATTTCAATGTCGACCTTTTCATCGTTGATTGGCTTGAAAAGCTCGGCGTGGCCTATGACGTC GTCACCGATGAAGACTTGCATGCGGAGCAGGCAGCTTTGCTCGCGCCTTACGCGACCGTCATTACTGGTTCGCATCCCGA ATACGCGTCGCGTGAAATGCTCGATGCGATCGAGTGCTATCTCCGAACGGGCGGCCGGCTCATGTACATGGGAGGCAACG GCTTTTACTGGCGCATCGCATTTCATCCCGAGCGCAGCGGTGTGATCGAGGTTCGGCGAGCGGATGGCGTGCGCGCCTGG GATGCGGAGCCGGGCGCACTGCATTTGAGCTTCAATGGCGAGCGCGGTGGGTTGTGGCGGCAGGCGGGCCGAGCGCCACA GAGATTGGTCGGTGTGGGCTTTGTCGCGCAGGGCTTTGATCGTTGCAGCTATTATCGACGCACGTGCGCGTCGTACGATC CGTGCTTGGCGTGGATGTTCGAAGGCATATGTGGCGAAGTTTTCGGTGATTACGGAATGTTGAAAGGAGGCGCGGCGGGC ATCGAGATCGATGCCTGTAGTGATGACCTAGGTACGCCACCTCAAGCAATCGTGATCGCCCGCAGCGAAAATCATTCGAA TACGTATGAACAGGCGGGCGAGGAAGTGCTGGTTCCGCACGGTGCGACGGATGCACTACTCAATGCATCCGTCCGCGCAG AGATGGTTTTCTTCGCCATTCCCGGTGGCGGCGCCGTTTTTTCGACCGGCTCGATCGCTTACGCCGGCGCACTGGGCTGT AGCGGTCGCGATCATGATGTGTTCAGGTTGACGACGAACGTGCTGTGCCGGTTTGTCGACCCTGCGCCTTTCGATTTCGA TAAGCGCCAAGGCAGGCCTTTGAAGCAATCGTGA
Upstream 100 bases:
>100_bases TTCAGCGTAGGCAACTTGCTTCGCGGTTTGGTGTTTTTGCTGCCGCAGCGTTGGGTGGAAAGCCCCGTGTGGTGGCCGAC GAAGCGACCGGTGGTAACGG
Downstream 100 bases:
>100_bases CCGATGGCCGCCAGTAAGATGAACGTGACGCCTCGAGTTCGGCCCGGCGGCGTCGGGAGAGACCGATGGCAATAACGAAA TGTGGCGAGCTGTCTGAACA
Product: N,N-dimethylformamidase large subunit
Products: NA
Alternate protein names: N,N-dimethylformamidase heavy chain [H]
Number of amino acids: Translated: 757; Mature: 756
Protein sequence:
>757_residues MSAIIAYSDRWSVAPGETIRFMVSSANAEPYDVQIVRLRQPNAGPGASSFEPECVATPCNGRYEGRTQTIPIGSLAVFDR LALDVSDGFSLTACIRPTTPRKGRQAIMGAWSEHQMTGSGLELDERGALQLVLGRPGLAPVYVSTGVPMTPRWHRVAASF DAAAGAVTLWQEPLSRHDFHNEAPVSVTVNVPFCPAAFAGPFTMAAWSADRTDEPSAWEGWQFACHFNGCIARPRVARGP LARDEIALLDAWPERADLGERVVAAWDFTQGISGDAVTDLGLRQHHGILINQPTRAVPGHDWEGEVFAWPLAPDRYGAIH FHDDDLVDACWASDFEWVVPNALRSGVYAAHLTSDVSEFWIPFVVRPPRGKSNKSTARILLLLPTATYIAYQNHRTRFSS LASERLHGCLSLLDAVDVAFLDTPEMGLSTYDRHSDGSGVAYASRHRPAQNVRPDGRLWNFNVDLFIVDWLEKLGVAYDV VTDEDLHAEQAALLAPYATVITGSHPEYASREMLDAIECYLRTGGRLMYMGGNGFYWRIAFHPERSGVIEVRRADGVRAW DAEPGALHLSFNGERGGLWRQAGRAPQRLVGVGFVAQGFDRCSYYRRTCASYDPCLAWMFEGICGEVFGDYGMLKGGAAG IEIDACSDDLGTPPQAIVIARSENHSNTYEQAGEEVLVPHGATDALLNASVRAEMVFFAIPGGGAVFSTGSIAYAGALGC SGRDHDVFRLTTNVLCRFVDPAPFDFDKRQGRPLKQS
Sequences:
>Translated_757_residues MSAIIAYSDRWSVAPGETIRFMVSSANAEPYDVQIVRLRQPNAGPGASSFEPECVATPCNGRYEGRTQTIPIGSLAVFDR LALDVSDGFSLTACIRPTTPRKGRQAIMGAWSEHQMTGSGLELDERGALQLVLGRPGLAPVYVSTGVPMTPRWHRVAASF DAAAGAVTLWQEPLSRHDFHNEAPVSVTVNVPFCPAAFAGPFTMAAWSADRTDEPSAWEGWQFACHFNGCIARPRVARGP LARDEIALLDAWPERADLGERVVAAWDFTQGISGDAVTDLGLRQHHGILINQPTRAVPGHDWEGEVFAWPLAPDRYGAIH FHDDDLVDACWASDFEWVVPNALRSGVYAAHLTSDVSEFWIPFVVRPPRGKSNKSTARILLLLPTATYIAYQNHRTRFSS LASERLHGCLSLLDAVDVAFLDTPEMGLSTYDRHSDGSGVAYASRHRPAQNVRPDGRLWNFNVDLFIVDWLEKLGVAYDV VTDEDLHAEQAALLAPYATVITGSHPEYASREMLDAIECYLRTGGRLMYMGGNGFYWRIAFHPERSGVIEVRRADGVRAW DAEPGALHLSFNGERGGLWRQAGRAPQRLVGVGFVAQGFDRCSYYRRTCASYDPCLAWMFEGICGEVFGDYGMLKGGAAG IEIDACSDDLGTPPQAIVIARSENHSNTYEQAGEEVLVPHGATDALLNASVRAEMVFFAIPGGGAVFSTGSIAYAGALGC SGRDHDVFRLTTNVLCRFVDPAPFDFDKRQGRPLKQS >Mature_756_residues SAIIAYSDRWSVAPGETIRFMVSSANAEPYDVQIVRLRQPNAGPGASSFEPECVATPCNGRYEGRTQTIPIGSLAVFDRL ALDVSDGFSLTACIRPTTPRKGRQAIMGAWSEHQMTGSGLELDERGALQLVLGRPGLAPVYVSTGVPMTPRWHRVAASFD AAAGAVTLWQEPLSRHDFHNEAPVSVTVNVPFCPAAFAGPFTMAAWSADRTDEPSAWEGWQFACHFNGCIARPRVARGPL ARDEIALLDAWPERADLGERVVAAWDFTQGISGDAVTDLGLRQHHGILINQPTRAVPGHDWEGEVFAWPLAPDRYGAIHF HDDDLVDACWASDFEWVVPNALRSGVYAAHLTSDVSEFWIPFVVRPPRGKSNKSTARILLLLPTATYIAYQNHRTRFSSL ASERLHGCLSLLDAVDVAFLDTPEMGLSTYDRHSDGSGVAYASRHRPAQNVRPDGRLWNFNVDLFIVDWLEKLGVAYDVV TDEDLHAEQAALLAPYATVITGSHPEYASREMLDAIECYLRTGGRLMYMGGNGFYWRIAFHPERSGVIEVRRADGVRAWD AEPGALHLSFNGERGGLWRQAGRAPQRLVGVGFVAQGFDRCSYYRRTCASYDPCLAWMFEGICGEVFGDYGMLKGGAAGI EIDACSDDLGTPPQAIVIARSENHSNTYEQAGEEVLVPHGATDALLNASVRAEMVFFAIPGGGAVFSTGSIAYAGALGCS GRDHDVFRLTTNVLCRFVDPAPFDFDKRQGRPLKQS
Specific function: Hydrolyzes N,N-dimethylformamide, and to a lesser extent N,N-dimethylacetamide and N,N-diethylacetamide. Has no activity against the substituted amides N-methylformamide, N- ethylformamide, N-ethylformamide and N-methylacetamide or the unsubstituted amide
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 [H]
Pfam domain/function: NA
EC number: =3.5.1.56 [H]
Molecular weight: Translated: 82785; Mature: 82654
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIIAYSDRWSVAPGETIRFMVSSANAEPYDVQIVRLRQPNAGPGASSFEPECVATPCN CCEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCC GRYEGRTQTIPIGSLAVFDRLALDVSDGFSLTACIRPTTPRKGRQAIMGAWSEHQMTGSG CCCCCCEEEECCCHHHHHHHHEEEECCCCEEEEEECCCCCCCCHHHHHCCCHHCCCCCCC LELDERGALQLVLGRPGLAPVYVSTGVPMTPRWHRVAASFDAAAGAVTLWQEPLSRHDFH CCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC NEAPVSVTVNVPFCPAAFAGPFTMAAWSADRTDEPSAWEGWQFACHFNGCIARPRVARGP CCCCEEEEEECCCCCCHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC LARDEIALLDAWPERADLGERVVAAWDFTQGISGDAVTDLGLRQHHGILINQPTRAVPGH CCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEECCCCHHHCCEEEECCCCCCCCC DWEGEVFAWPLAPDRYGAIHFHDDDLVDACWASDFEWVVPNALRSGVYAAHLTSDVSEFW CCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCCEECCHHHHCCEEEEHHHHHHHHCC IPFVVRPPRGKSNKSTARILLLLPTATYIAYQNHRTRFSSLASERLHGCLSLLDAVDVAF EEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEE LDTPEMGLSTYDRHSDGSGVAYASRHRPAQNVRPDGRLWNFNVDLFIVDWLEKLGVAYDV ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEEEHHHHHCCCEEEE VTDEDLHAEQAALLAPYATVITGSHPEYASREMLDAIECYLRTGGRLMYMGGNGFYWRIA ECCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEE FHPERSGVIEVRRADGVRAWDAEPGALHLSFNGERGGLWRQAGRAPQRLVGVGFVAQGFD ECCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHH RCSYYRRTCASYDPCLAWMFEGICGEVFGDYGMLKGGAAGIEIDACSDDLGTPPQAIVIA HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEE RSENHSNTYEQAGEEVLVPHGATDALLNASVRAEMVFFAIPGGGAVFSTGSIAYAGALGC ECCCCCCHHHHCCCEEEECCCCHHHHHCCCEEEEEEEEEECCCCEEEECCCEEEEEEECC SGRDHDVFRLTTNVLCRFVDPAPFDFDKRQGRPLKQS CCCCCCEEEEEHHHHHEECCCCCCCCCHHCCCCCCCC >Mature Secondary Structure SAIIAYSDRWSVAPGETIRFMVSSANAEPYDVQIVRLRQPNAGPGASSFEPECVATPCN CEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCC GRYEGRTQTIPIGSLAVFDRLALDVSDGFSLTACIRPTTPRKGRQAIMGAWSEHQMTGSG CCCCCCEEEECCCHHHHHHHHEEEECCCCEEEEEECCCCCCCCHHHHHCCCHHCCCCCCC LELDERGALQLVLGRPGLAPVYVSTGVPMTPRWHRVAASFDAAAGAVTLWQEPLSRHDFH CCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC NEAPVSVTVNVPFCPAAFAGPFTMAAWSADRTDEPSAWEGWQFACHFNGCIARPRVARGP CCCCEEEEEECCCCCCHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC LARDEIALLDAWPERADLGERVVAAWDFTQGISGDAVTDLGLRQHHGILINQPTRAVPGH CCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEECCCCHHHCCEEEECCCCCCCCC DWEGEVFAWPLAPDRYGAIHFHDDDLVDACWASDFEWVVPNALRSGVYAAHLTSDVSEFW CCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCCEECCHHHHCCEEEEHHHHHHHHCC IPFVVRPPRGKSNKSTARILLLLPTATYIAYQNHRTRFSSLASERLHGCLSLLDAVDVAF EEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEE LDTPEMGLSTYDRHSDGSGVAYASRHRPAQNVRPDGRLWNFNVDLFIVDWLEKLGVAYDV ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEEEHHHHHCCCEEEE VTDEDLHAEQAALLAPYATVITGSHPEYASREMLDAIECYLRTGGRLMYMGGNGFYWRIA ECCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEE FHPERSGVIEVRRADGVRAWDAEPGALHLSFNGERGGLWRQAGRAPQRLVGVGFVAQGFD ECCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHH RCSYYRRTCASYDPCLAWMFEGICGEVFGDYGMLKGGAAGIEIDACSDDLGTPPQAIVIA HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEE RSENHSNTYEQAGEEVLVPHGATDALLNASVRAEMVFFAIPGGGAVFSTGSIAYAGALGC ECCCCCCHHHHCCCEEEECCCCHHHHHCCCEEEEEEEEEECCCCEEEECCCEEEEEEECC SGRDHDVFRLTTNVLCRFVDPAPFDFDKRQGRPLKQS CCCCCCEEEEEHHHHHEECCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA