Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027226

Identifier: 238027226

GI number: 238027226

Start: 1764526

End: 1765812

Strand: Reverse

Name: 238027226

Synonym: bglu_1g16120

Alternate gene names: NA

Gene position: 1765812-1764526 (Counterclockwise)

Preceding gene: 238027227

Following gene: 238027221

Centisome position: 45.2

GC content: 72.18

Gene sequence:

>1287_bases
ATGTCCGTCCCGTCACCGGCCGCTGCCGGTTCCGCCCGCCTGCCCGCGGCACGCCACGAGATCGTGATCGTCGGCGCCGG
CGCCGCCGGCATCGCTACCGCAGCGAGCCTGCTGCGGCGCGACCGCTCGCTCGACATCGCGCTCGTCGATCCCGCCGACA
CGCATTACTACCAGCCCGGCTGGACCCTGGTCGGCGGCGGCGTCTTCGATGCGGCGTCCACCGCGCGGCCAATGAAATCG
GTGCTGCCGCGCGGCGTCACGCATATCCGCGCGGCGGTCACCGCGTTCTCGCCGGAGCACCACACCGTGACGCTCGAGGG
CGGCGCCACGCTCGGCTATCGCGAACTGATCGTCTGCCCCGGTCTGGAACTGCACTGGGCCGGCATCGACGGGCTCGTCG
ACACACTCGGGCGGCACGGCGTGACCTCGAACTACCGCTATGATCTCGCCCCCTACACGTGGCAGCTCGTGCAATCGCTC
AAGCAAGGGCGCGCGCTGTTTACCCAGCCGCCGATGCCGATCAAGTGCGCGGGCGCACCGCAAAAGGCGATGTACCTGGC
CGCCGATCACTGGCGCCGCAGCGGCCGGCTGGCCGGCATCGAGATCGAATTCCACCTGGCCGGCGCGGCGCTGTTCGGCG
TGCCGGCCTACGTGCCTGCCCTGATGGAGTCGGTCCAGGCCTACGGGATCGACCTGCGCTTCGGCGACCAGCTGATCGCC
GTGGACGGCCCGGGCCGGCGCGCCACGTTCCGGCGCGCCCGCGCGGAGGCCGACGGCGGCGGCAGCGAGGAGATCACGCG
CGAGTTCGACCTGCTGCACGTGGTGCCGCCGCAGCGCGCGCCGGGCTTCGTGCGCGACAGCGCGCTCGCCGACCCGGCCG
GCTGGATCGACGTCGATCCGGCGACGCTGCGCCATCGCATGTTCGCCAACATTCACGCGCTAGGCGACGCGACCAACACC
ACCAACGCCAAGACCGCCGCCGCCGCGCGCAAGCAGGCGCCGGTGGTCGCCCACAACGTGCTGGCCGCGCTCGGCCGCGC
GCGCGGCGTGGCGCGCTACGACGGCTACGGCTCGTGTCCGCTGACGGTGGCGCGCGGCCGCATCGTGCTGGCCGAATTCC
TCTACGGCGGCAAGGTCGCGCCGACCTTCCCGAACTGGGTCAACGACGGCACGCGGCCGTCGCGCCTGGCCTGGTTTCTG
AAGGAAAAGGTGCTGCCGCCGCTGTACTGGCATGCGATGCTGAAGGGCCGCGAGTGGTGTGCGCGGCCCGCGATCAGCGA
GGCCTGA

Upstream 100 bases:

>100_bases
TCGACGCGCTCTAAGGCGCCGCCCGCGCCGCCGGGCAGCGCCGCTTCGCTGCACCACCACAACAACGCCATCAAGCATAT
CCCCTGCCAGGAGCCCCAAC

Downstream 100 bases:

>100_bases
GCGGCCTCAGGCGCTCGCGCGGGGCCCGATGCAGGGGCGCGGCGCGCGACGATGCGGGGCGTCGCGATCGGCAAGTGGGC
GGGGCGTGTGGCCCGCCCAC

Product: pyridine nucleotide-disulfide family oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide Dehydrogenase Flavoprotein Subunit; Twin-Arginine Translocation Pathway Signal; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide-Quinone Reductase; Sulfide Quinone Oxidoreductase-Like Protein; Flavoprotein Reductase; Sulfide Dehydrogenase; Anti-Anti-Sigma Regulatory Factor; Filamentous Hemagglutinin; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone-Rductase; Sulphide Quinone Reductase; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Related Protein; Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSVPSPAAAGSARLPAARHEIVIVGAGAAGIATAASLLRRDRSLDIALVDPADTHYYQPGWTLVGGGVFDAASTARPMKS
VLPRGVTHIRAAVTAFSPEHHTVTLEGGATLGYRELIVCPGLELHWAGIDGLVDTLGRHGVTSNYRYDLAPYTWQLVQSL
KQGRALFTQPPMPIKCAGAPQKAMYLAADHWRRSGRLAGIEIEFHLAGAALFGVPAYVPALMESVQAYGIDLRFGDQLIA
VDGPGRRATFRRARAEADGGGSEEITREFDLLHVVPPQRAPGFVRDSALADPAGWIDVDPATLRHRMFANIHALGDATNT
TNAKTAAAARKQAPVVAHNVLAALGRARGVARYDGYGSCPLTVARGRIVLAEFLYGGKVAPTFPNWVNDGTRPSRLAWFL
KEKVLPPLYWHAMLKGREWCARPAISEA

Sequences:

>Translated_428_residues
MSVPSPAAAGSARLPAARHEIVIVGAGAAGIATAASLLRRDRSLDIALVDPADTHYYQPGWTLVGGGVFDAASTARPMKS
VLPRGVTHIRAAVTAFSPEHHTVTLEGGATLGYRELIVCPGLELHWAGIDGLVDTLGRHGVTSNYRYDLAPYTWQLVQSL
KQGRALFTQPPMPIKCAGAPQKAMYLAADHWRRSGRLAGIEIEFHLAGAALFGVPAYVPALMESVQAYGIDLRFGDQLIA
VDGPGRRATFRRARAEADGGGSEEITREFDLLHVVPPQRAPGFVRDSALADPAGWIDVDPATLRHRMFANIHALGDATNT
TNAKTAAAARKQAPVVAHNVLAALGRARGVARYDGYGSCPLTVARGRIVLAEFLYGGKVAPTFPNWVNDGTRPSRLAWFL
KEKVLPPLYWHAMLKGREWCARPAISEA
>Mature_427_residues
SVPSPAAAGSARLPAARHEIVIVGAGAAGIATAASLLRRDRSLDIALVDPADTHYYQPGWTLVGGGVFDAASTARPMKSV
LPRGVTHIRAAVTAFSPEHHTVTLEGGATLGYRELIVCPGLELHWAGIDGLVDTLGRHGVTSNYRYDLAPYTWQLVQSLK
QGRALFTQPPMPIKCAGAPQKAMYLAADHWRRSGRLAGIEIEFHLAGAALFGVPAYVPALMESVQAYGIDLRFGDQLIAV
DGPGRRATFRRARAEADGGGSEEITREFDLLHVVPPQRAPGFVRDSALADPAGWIDVDPATLRHRMFANIHALGDATNTT
NAKTAAAARKQAPVVAHNVLAALGRARGVARYDGYGSCPLTVARGRIVLAEFLYGGKVAPTFPNWVNDGTRPSRLAWFLK
EKVLPPLYWHAMLKGREWCARPAISEA

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=398, Percent_Identity=35.929648241206, Blast_Score=286, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI115534373, Length=345, Percent_Identity=36.231884057971, Blast_Score=225, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17539680, Length=422, Percent_Identity=31.7535545023697, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24657386, Length=388, Percent_Identity=36.0824742268041, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24657391, Length=388, Percent_Identity=36.0824742268041, Blast_Score=246, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45919; Mature: 45788

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPSPAAAGSARLPAARHEIVIVGAGAAGIATAASLLRRDRSLDIALVDPADTHYYQPG
CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCC
WTLVGGGVFDAASTARPMKSVLPRGVTHIRAAVTAFSPEHHTVTLEGGATLGYRELIVCP
CEEECCCHHCCHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEEEEECCCCCCCEEEEEEC
GLELHWAGIDGLVDTLGRHGVTSNYRYDLAPYTWQLVQSLKQGRALFTQPPMPIKCAGAP
CCEEEECCHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCEEECCCCCCEEECCCC
QKAMYLAADHWRRSGRLAGIEIEFHLAGAALFGVPAYVPALMESVQAYGIDLRFGDQLIA
CHHEEEEHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEE
VDGPGRRATFRRARAEADGGGSEEITREFDLLHVVPPQRAPGFVRDSALADPAGWIDVDP
ECCCCCHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEECCH
ATLRHRMFANIHALGDATNTTNAKTAAAARKQAPVVAHNVLAALGRARGVARYDGYGSCP
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCC
LTVARGRIVLAEFLYGGKVAPTFPNWVNDGTRPSRLAWFLKEKVLPPLYWHAMLKGREWC
EEEECCCEEEEHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHH
ARPAISEA
CCCCCCCC
>Mature Secondary Structure 
SVPSPAAAGSARLPAARHEIVIVGAGAAGIATAASLLRRDRSLDIALVDPADTHYYQPG
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCC
WTLVGGGVFDAASTARPMKSVLPRGVTHIRAAVTAFSPEHHTVTLEGGATLGYRELIVCP
CEEECCCHHCCHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEEEEECCCCCCCEEEEEEC
GLELHWAGIDGLVDTLGRHGVTSNYRYDLAPYTWQLVQSLKQGRALFTQPPMPIKCAGAP
CCEEEECCHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCEEECCCCCCEEECCCC
QKAMYLAADHWRRSGRLAGIEIEFHLAGAALFGVPAYVPALMESVQAYGIDLRFGDQLIA
CHHEEEEHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEE
VDGPGRRATFRRARAEADGGGSEEITREFDLLHVVPPQRAPGFVRDSALADPAGWIDVDP
ECCCCCHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEECCH
ATLRHRMFANIHALGDATNTTNAKTAAAARKQAPVVAHNVLAALGRARGVARYDGYGSCP
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCC
LTVARGRIVLAEFLYGGKVAPTFPNWVNDGTRPSRLAWFLKEKVLPPLYWHAMLKGREWC
EEEECCCEEEEHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHH
ARPAISEA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA