| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027141
Identifier: 238027141
GI number: 238027141
Start: 1687512
End: 1687871
Strand: Reverse
Name: 238027141
Synonym: bglu_1g15260
Alternate gene names: NA
Gene position: 1687871-1687512 (Counterclockwise)
Preceding gene: 238027142
Following gene: 238027140
Centisome position: 43.21
GC content: 62.78
Gene sequence:
>360_bases GTGGCCCTGCACACCCAACTGCCGATATATCGAGCCGCGTACTCGCTGCTCGATACCGTCACGGACGTGGTCAAGAACAT GCCCCGTGACTTCAAGCGCTCTATCGGCGAGAAGATCAGCGCGGAATGCATCGAGATCATGGTGCTGGTGTTCCGCGCCA ATGTCGCGGCCGACAAGGCGCCGCATCTGGCCGAGCTCATCGAGCGCCTTCAGGTGATCGAGTTGCTGCTTCGGCTCGGC ATGGACAAACGCCTGATCGCGCGCGGAGCATACGCCGGCGCAGTCGAGCAAACTACCAGCATCGGGAAGCAGGCCACCGG GTGGAGAAACGCCGCGCGTCGCCCGCTTCGTGGTGGTTAA
Upstream 100 bases:
>100_bases TCAGCAGCGGCGGCCAGGACTACGGCCGCCAGCTCGACGAGTTCCGAGCCCGAGCCGTCCGCAGATTTATCCCTTCAGTA ATTTAACCATTTAATCCATC
Downstream 100 bases:
>100_bases GGCTGCCATGACTGAGCGATCTATCAATCTGGTCGTGCCGCTGGCCCACAAGGCCACCGCCATGCGCAATGAGGATACCG ACCGCCAGCGTGCGGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MALHTQLPIYRAAYSLLDTVTDVVKNMPRDFKRSIGEKISAECIEIMVLVFRANVAADKAPHLAELIERLQVIELLLRLG MDKRLIARGAYAGAVEQTTSIGKQATGWRNAARRPLRGG
Sequences:
>Translated_119_residues MALHTQLPIYRAAYSLLDTVTDVVKNMPRDFKRSIGEKISAECIEIMVLVFRANVAADKAPHLAELIERLQVIELLLRLG MDKRLIARGAYAGAVEQTTSIGKQATGWRNAARRPLRGG >Mature_118_residues ALHTQLPIYRAAYSLLDTVTDVVKNMPRDFKRSIGEKISAECIEIMVLVFRANVAADKAPHLAELIERLQVIELLLRLGM DKRLIARGAYAGAVEQTTSIGKQATGWRNAARRPLRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13201; Mature: 13070
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHTQLPIYRAAYSLLDTVTDVVKNMPRDFKRSIGEKISAECIEIMVLVFRANVAADKA CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PHLAELIERLQVIELLLRLGMDKRLIARGAYAGAVEQTTSIGKQATGWRNAARRPLRGG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC >Mature Secondary Structure ALHTQLPIYRAAYSLLDTVTDVVKNMPRDFKRSIGEKISAECIEIMVLVFRANVAADKA CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PHLAELIERLQVIELLLRLGMDKRLIARGAYAGAVEQTTSIGKQATGWRNAARRPLRGG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA