Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027142

Identifier: 238027142

GI number: 238027142

Start: 1687886

End: 1688371

Strand: Reverse

Name: 238027142

Synonym: bglu_1g15270

Alternate gene names: NA

Gene position: 1688371-1687886 (Counterclockwise)

Preceding gene: 238027143

Following gene: 238027141

Centisome position: 43.22

GC content: 62.55

Gene sequence:

>486_bases
ATGACGATCACTCTTGCCTCCATCGAGGCCGCCCAGGAGAAGTTGACGGACGACCACGCGCGCATCAACGCGATGATCGA
AGCCTTTCGCAAACAGCCTCAGTCGACGCAGATCACGATTCCTGCAGTCACGATCCCGCTCGCCGCTGGGGAGCGTCTCG
CCGGCGCAATCCATAACGACGACGGTACTGTCGCGCACTACGTGATCCTGCTGCCAGGCGACGTAGACGATGTCACTTGG
CAGGCTGCCAAGGACTGGGCATCCGAGCAAGGCGGCGAGTTGCCGAGCCGCCGCGAGCAGTCGCTGCTGTACTCGAACCT
GAAGGACGAGTTCGAGGGCGCCTGGTACTGGTCCGCCGAGGTCCATGAATCTAACTCCGGCTGGGCGTGGTGCCAGGGCT
TCAGCAGCGGCGGCCAGGACTACGGCCGCCAGCTCGACGAGTTCCGAGCCCGAGCCGTCCGCAGATTTATCCCTTCAGTA
ATTTAA

Upstream 100 bases:

>100_bases
CGGCGACCAGGGCAGCAGCCACCAGAACTACGAGTTCCGAGCCCGAGCCGTCCGCAGATTGTCGATTTAACCCTTCGTCC
ATTTACATCGGAGCATCGCA

Downstream 100 bases:

>100_bases
CCATTTAATCCATCGTGGCCCTGCACACCCAACTGCCGATATATCGAGCCGCGTACTCGCTGCTCGATACCGTCACGGAC
GTGGTCAAGAACATGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTITLASIEAAQEKLTDDHARINAMIEAFRKQPQSTQITIPAVTIPLAAGERLAGAIHNDDGTVAHYVILLPGDVDDVTW
QAAKDWASEQGGELPSRREQSLLYSNLKDEFEGAWYWSAEVHESNSGWAWCQGFSSGGQDYGRQLDEFRARAVRRFIPSV
I

Sequences:

>Translated_161_residues
MTITLASIEAAQEKLTDDHARINAMIEAFRKQPQSTQITIPAVTIPLAAGERLAGAIHNDDGTVAHYVILLPGDVDDVTW
QAAKDWASEQGGELPSRREQSLLYSNLKDEFEGAWYWSAEVHESNSGWAWCQGFSSGGQDYGRQLDEFRARAVRRFIPSV
I
>Mature_160_residues
TITLASIEAAQEKLTDDHARINAMIEAFRKQPQSTQITIPAVTIPLAAGERLAGAIHNDDGTVAHYVILLPGDVDDVTWQ
AAKDWASEQGGELPSRREQSLLYSNLKDEFEGAWYWSAEVHESNSGWAWCQGFSSGGQDYGRQLDEFRARAVRRFIPSVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17891; Mature: 17760

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITLASIEAAQEKLTDDHARINAMIEAFRKQPQSTQITIPAVTIPLAAGERLAGAIHND
CEEEEHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECEEEEECCCCCHHHCEEECC
DGTVAHYVILLPGDVDDVTWQAAKDWASEQGGELPSRREQSLLYSNLKDEFEGAWYWSAE
CCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
VHESNSGWAWCQGFSSGGQDYGRQLDEFRARAVRRFIPSVI
EECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TITLASIEAAQEKLTDDHARINAMIEAFRKQPQSTQITIPAVTIPLAAGERLAGAIHND
EEEEHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECEEEEECCCCCHHHCEEECC
DGTVAHYVILLPGDVDDVTWQAAKDWASEQGGELPSRREQSLLYSNLKDEFEGAWYWSAE
CCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
VHESNSGWAWCQGFSSGGQDYGRQLDEFRARAVRRFIPSVI
EECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA