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The map label for this gene is yccA [C]

Identifier: 238027067

GI number: 238027067

Start: 1591615

End: 1592310

Strand: Reverse

Name: yccA [C]

Synonym: bglu_1g14460

Alternate gene names: 238027067

Gene position: 1592310-1591615 (Counterclockwise)

Preceding gene: 238027085

Following gene: 238027065

Centisome position: 40.76

GC content: 63.22

Gene sequence:

>696_bases
ATGAACGACTATCCGTACAACTTCGGCCGCGGCGGCGCGCTGACGGCCGAAACCCGCAACCGCGTGCTGCGGAACACTTA
CTGGCTGCTCGCGCTCTCGATGATTCCGACCGTGCTCGGCGCGTGGGCCGGGGTCGCGACGGGTTTCTCGCTGTTCGCCG
CGACGAGCCCGATGATGAGCCTGCTCGCGTTCTTCGCGATCGCGTTCGGCTTCATGTTCGCGATCGAGCGCACCAAGAAC
AGCAGCGCCGGCGTGTTCGTGCTGCTCGGCTTCACGTTCTTCATGGGCCTGATGCTGTCGCGGCTGCTGAGCTTCATTCT
CGGCTTTTCGAACGGCCCGTCGCTGATCATGCTCGCGTTCGGCGGCACCGGCGTGATCTTCGCGGCGATGGCCACCATCG
CCACGGTCAGCAAGCGTGATTTCTCGGGGCTCGGCAAGTGGCTGTTCGTCGGCGTGATCGTGCTGCTGCTGGCGATGGTC
GCGAACATGTTCCTGCATCTGCCGGCGCTGATGCTCACCGTGTCGGTGCTGGCGATCGTGATCTTCTCGGCCTACATGCT
ATTCGACGTGCAGCGCGTCGTGAACGGCGGCGAGACGAACTACATCACCGCCACGCTCGCGATCTATCTCGACCTGTACA
ACGTGTTCACGAACCTGCTCGCGCTGCTCGGCATTTTCGGCGGCAACCGTAACTGA

Upstream 100 bases:

>100_bases
GCGGCAAACCGATCTGATGTAGTGCGGCGTCCGGATTGCTGCAGCGCATCGCGATGCGTCCGGTTTCCGATCGCTGTCAC
GTTCCATGCTAGGAGAAACC

Downstream 100 bases:

>100_bases
ACGAGGCGAGTCGGGAGGTCATCACTCCCCGGATTCGCCACGAAAAACCGGCCCGATGATCGGGCCGGTTTTTTTATGAG
CGCTCGCTCGGCGCGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MNDYPYNFGRGGALTAETRNRVLRNTYWLLALSMIPTVLGAWAGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTKN
SSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATIATVSKRDFSGLGKWLFVGVIVLLLAMV
ANMFLHLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFTNLLALLGIFGGNRN

Sequences:

>Translated_231_residues
MNDYPYNFGRGGALTAETRNRVLRNTYWLLALSMIPTVLGAWAGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTKN
SSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATIATVSKRDFSGLGKWLFVGVIVLLLAMV
ANMFLHLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFTNLLALLGIFGGNRN
>Mature_231_residues
MNDYPYNFGRGGALTAETRNRVLRNTYWLLALSMIPTVLGAWAGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTKN
SSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATIATVSKRDFSGLGKWLFVGVIVLLLAMV
ANMFLHLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFTNLLALLGIFGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=208, Percent_Identity=37.5, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25008; Mature: 25008

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYPYNFGRGGALTAETRNRVLRNTYWLLALSMIPTVLGAWAGVATGFSLFAATSPMMS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAFFAIAFGFMFAIERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
GGTGVIFAAMATIATVSKRDFSGLGKWLFVGVIVLLLAMVANMFLHLPALMLTVSVLAIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDYPYNFGRGGALTAETRNRVLRNTYWLLALSMIPTVLGAWAGVATGFSLFAATSPMMS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAFFAIAFGFMFAIERTKNSSAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
GGTGVIFAAMATIATVSKRDFSGLGKWLFVGVIVLLLAMVANMFLHLPALMLTVSVLAIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]