| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027065
Identifier: 238027065
GI number: 238027065
Start: 1589173
End: 1590030
Strand: Reverse
Name: 238027065
Synonym: bglu_1g14440
Alternate gene names: NA
Gene position: 1590030-1589173 (Counterclockwise)
Preceding gene: 238027067
Following gene: 238027055
Centisome position: 40.7
GC content: 73.19
Gene sequence:
>858_bases ATGCGCTTGATCGACTGGAACATCCAATGGGGTCGGGACGCGAGCGGCCGGGTCGAGCTGGCACGCACCGTCGCGCAAGC CCGCGCCCTCGCCGATTTCGACGTGTGGTGCGTGCAGGAGCTCACGCGCGGCTTCGCTGCCCTGCCCGGCGGCCCCGGGC CGGACCAGTTCGCCGAGCTGGCCGCGCTGCTGCCGGGCTACACGGTGATCGAGGCGATCGCGGTGGATCTGCCGCCCGCC GCTGGCGGCGTCGCGCGGCGCCAGTTCGGCAACGCGATCGCGACGCGGCTGCCGGTCGGACGCGTGCTGCGCCACATGCT GCCCTGGCCGGCCGAGGCCGGCACGCCGTCGATGCCGCGCATCGCGCTCGAGGTCAACCTATGCGGCGCCGGCGGGCCGC TGCGGATCGTCACGACGCATCTGGAGTTCTACTCGGCCGCACAGCGCCTCGCGCAGGTCGACGCGCTGCGCGAGCAGCAT CGCGAAGCGGCCGGCCACGCGCACCGCCCGGCACCGGCGGAAACGCCCGACGGGCCGTTCGCGGGATCGGCGCGCGCGCT CGACGCGATCGTCTGCGGCGACTTCAACAGCGCCTATCGGGACGACGCCTATCGGCGGATCACCGCCCCGATCGCCGGGG CGCCGGATCTCGTCGACGCCTGGGTGCAGGCGCACCCGGGCCAGACGCCGCCGCCCACGGCGGGCGTCTACGATACGGAG CAGTGGCAGGACGGCGCGATGACCTGCGATTTCGTGTTCGTGACCGACACGCTCGCAAAGCGGATCGTGCGCTGCGAGAT CGACGGCGCGACGCGGGCCTCCGATCACCAGCCGATCCTGCTCGAACTGCGCGACTGA
Upstream 100 bases:
>100_bases GCGCGGGAGTGGGGACGGCTTCGGACACCAGCTTTTCCTGACGATCGTTTGGGGGAAGGCGAGATTGTAGACGAATGAAC GTGCGCCATCGGAGATTGAT
Downstream 100 bases:
>100_bases CCAGGGCGCTGCCGCGCGGTTCACGCCGGGCCGGCGCGCGGGCGGCCCGGACAAACGCGCTGCCGCCTACTTGGGGAACG CCGCCAGGTACTGGGCCCAA
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Phosphatase; Endonuclease/Exonuclease/Phosphatase Family Protein; Phosphatase Protein; Endonuclease / Exonuclease / Phosphatase; Metal-Dependent Exonuclease Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRLIDWNIQWGRDASGRVELARTVAQARALADFDVWCVQELTRGFAALPGGPGPDQFAELAALLPGYTVIEAIAVDLPPA AGGVARRQFGNAIATRLPVGRVLRHMLPWPAEAGTPSMPRIALEVNLCGAGGPLRIVTTHLEFYSAAQRLAQVDALREQH REAAGHAHRPAPAETPDGPFAGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQTPPPTAGVYDTE QWQDGAMTCDFVFVTDTLAKRIVRCEIDGATRASDHQPILLELRD
Sequences:
>Translated_285_residues MRLIDWNIQWGRDASGRVELARTVAQARALADFDVWCVQELTRGFAALPGGPGPDQFAELAALLPGYTVIEAIAVDLPPA AGGVARRQFGNAIATRLPVGRVLRHMLPWPAEAGTPSMPRIALEVNLCGAGGPLRIVTTHLEFYSAAQRLAQVDALREQH REAAGHAHRPAPAETPDGPFAGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQTPPPTAGVYDTE QWQDGAMTCDFVFVTDTLAKRIVRCEIDGATRASDHQPILLELRD >Mature_285_residues MRLIDWNIQWGRDASGRVELARTVAQARALADFDVWCVQELTRGFAALPGGPGPDQFAELAALLPGYTVIEAIAVDLPPA AGGVARRQFGNAIATRLPVGRVLRHMLPWPAEAGTPSMPRIALEVNLCGAGGPLRIVTTHLEFYSAAQRLAQVDALREQH REAAGHAHRPAPAETPDGPFAGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQTPPPTAGVYDTE QWQDGAMTCDFVFVTDTLAKRIVRCEIDGATRASDHQPILLELRD
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30681; Mature: 30681
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIDWNIQWGRDASGRVELARTVAQARALADFDVWCVQELTRGFAALPGGPGPDQFAEL CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AALLPGYTVIEAIAVDLPPAAGGVARRQFGNAIATRLPVGRVLRHMLPWPAEAGTPSMPR HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCE IALEVNLCGAGGPLRIVTTHLEFYSAAQRLAQVDALREQHREAAGHAHRPAPAETPDGPF EEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQTPPPTAGVYDTE CCCHHHHEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC QWQDGAMTCDFVFVTDTLAKRIVRCEIDGATRASDHQPILLELRD CCCCCCCEEEEEEHHHHHHHHHHEEECCCCCCCCCCCCEEEEECC >Mature Secondary Structure MRLIDWNIQWGRDASGRVELARTVAQARALADFDVWCVQELTRGFAALPGGPGPDQFAEL CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AALLPGYTVIEAIAVDLPPAAGGVARRQFGNAIATRLPVGRVLRHMLPWPAEAGTPSMPR HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCE IALEVNLCGAGGPLRIVTTHLEFYSAAQRLAQVDALREQHREAAGHAHRPAPAETPDGPF EEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQTPPPTAGVYDTE CCCHHHHEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC QWQDGAMTCDFVFVTDTLAKRIVRCEIDGATRASDHQPILLELRD CCCCCCCEEEEEEHHHHHHHHHHEEECCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA