| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is trxA [H]
Identifier: 238027055
GI number: 238027055
Start: 1578601
End: 1578927
Strand: Reverse
Name: trxA [H]
Synonym: bglu_1g14340
Alternate gene names: 238027055
Gene position: 1578927-1578601 (Counterclockwise)
Preceding gene: 238027065
Following gene: 238027054
Centisome position: 40.42
GC content: 58.41
Gene sequence:
>327_bases ATGAGCGAACAGATCAAACACATCAGCGACACGTCGTTCGAACAGGACGTCGTACGATCCGACAAGCCCGTGCTGCTCGA TTTCTGGGCCGAATGGTGCGGCCCCTGCAAGATGATCGCCCCGATCCTCGACGAAATCTCGAAGGAATACGGCGACAAGC TGACGATCGCAAAGATCAACGTCGACGACAACACGGCGACGCCGGCGCGTTACGGTGTGCGCGGCATCCCGACGCTGATT CTGTTCAAGAACGGCGTGCTCGCCGCACAAAAGGTCGGCGCCCTGTCCAAATCGCAATTGACCGCGTTTCTCGACAGCCA CCTGTAA
Upstream 100 bases:
>100_bases TGGCCGCCGTTCCCTGCGGGGCGGACCTGCCTGAACCGGCGGCCGGCGCACCTGACCGGCACCCGCAGGCAGTCCCCGAA ACGAATGAGGTATTGACCAA
Downstream 100 bases:
>100_bases TAAGCGATTATCTCCGCCACGCGCCTGTTGCCGGCTGGCAACAGGCGCGTGGTGCAGCCGATGTGCGGCAAAGCAAGGCC GAATCGGCGTGTGCTAGAAT
Product: thioredoxin 1
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSEQIKHISDTSFEQDVVRSDKPVLLDFWAEWCGPCKMIAPILDEISKEYGDKLTIAKINVDDNTATPARYGVRGIPTLI LFKNGVLAAQKVGALSKSQLTAFLDSHL
Sequences:
>Translated_108_residues MSEQIKHISDTSFEQDVVRSDKPVLLDFWAEWCGPCKMIAPILDEISKEYGDKLTIAKINVDDNTATPARYGVRGIPTLI LFKNGVLAAQKVGALSKSQLTAFLDSHL >Mature_107_residues SEQIKHISDTSFEQDVVRSDKPVLLDFWAEWCGPCKMIAPILDEISKEYGDKLTIAKINVDDNTATPARYGVRGIPTLIL FKNGVLAAQKVGALSKSQLTAFLDSHL
Specific function: Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=93, Percent_Identity=41.9354838709677, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87082331, Length=108, Percent_Identity=64.8148148148148, Blast_Score=157, Evalue=1e-40, Organism=Escherichia coli, GI1788936, Length=92, Percent_Identity=36.9565217391304, Blast_Score=87, Evalue=2e-19, Organism=Escherichia coli, GI87081747, Length=84, Percent_Identity=34.5238095238095, Blast_Score=66, Evalue=5e-13, Organism=Caenorhabditis elegans, GI212646193, Length=112, Percent_Identity=34.8214285714286, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17509965, Length=76, Percent_Identity=39.4736842105263, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71998175, Length=87, Percent_Identity=39.0804597701149, Blast_Score=68, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17507705, Length=65, Percent_Identity=41.5384615384615, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17554386, Length=87, Percent_Identity=35.632183908046, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17510299, Length=77, Percent_Identity=40.2597402597403, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71980565, Length=85, Percent_Identity=36.4705882352941, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=77, Percent_Identity=44.1558441558442, Blast_Score=72, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321648, Length=94, Percent_Identity=37.2340425531915, Blast_Score=72, Evalue=1e-14, Organism=Drosophila melanogaster, GI24639826, Length=94, Percent_Identity=39.3617021276596, Blast_Score=87, Evalue=2e-18, Organism=Drosophila melanogaster, GI28573567, Length=92, Percent_Identity=34.7826086956522, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI17648013, Length=78, Percent_Identity=42.3076923076923, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI24583090, Length=78, Percent_Identity=42.3076923076923, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI24664269, Length=75, Percent_Identity=40, Blast_Score=73, Evalue=4e-14, Organism=Drosophila melanogaster, GI24639068, Length=93, Percent_Identity=32.258064516129, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI17530795, Length=74, Percent_Identity=36.4864864864865, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11935; Mature: 11804
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQIKHISDTSFEQDVVRSDKPVLLDFWAEWCGPCKMIAPILDEISKEYGDKLTIAKIN CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEE VDDNTATPARYGVRGIPTLILFKNGVLAAQKVGALSKSQLTAFLDSHL CCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure SEQIKHISDTSFEQDVVRSDKPVLLDFWAEWCGPCKMIAPILDEISKEYGDKLTIAKIN CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEE VDDNTATPARYGVRGIPTLILFKNGVLAAQKVGALSKSQLTAFLDSHL CCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7496529 [H]