| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027049
Identifier: 238027049
GI number: 238027049
Start: 1571677
End: 1573428
Strand: Reverse
Name: 238027049
Synonym: bglu_1g14280
Alternate gene names: NA
Gene position: 1573428-1571677 (Counterclockwise)
Preceding gene: 238027050
Following gene: 238027048
Centisome position: 40.28
GC content: 70.15
Gene sequence:
>1752_bases ATGAAGCCCGTCGTTCGCCTTACCGCCTCCGCCACGCGCGCGTTGCCGCGCTGGCTGCTGCTCACGCTCTGCCTCGTCTA CGCGGCGTTCGGCCTGTTCGGGCGCGATCCGTGGAAGAACGAGGACGCCGCGGGCTTCGGCGTGATGTGGACCATGGCGG GCGGCTCCGCGCACGACTGGCTGCTGCCGAACCTGGTCGGCAAGTTCGTCACCTCCGACGGTCCGCTCGGCTACTGGCTC GGCGCGCTCGGCATCCGCGCGTTCGGCGCGTGGTTCGACGCGAGCAATGCGTCACGCCTCGCCACCTGCGTGCTGTTCTG CGTGGCCTGCGCGTTCGTCTGGTCCACCGCCTACCTGCTCGGCCGCCGCGCGGAGGTGCAGCCGTTCAAGTACGCGTTCG GCGGCGAGCCGGAGCCGCGCGACTACGGCCGCACGCTCGCCGACGGCGCGCTGCTGGTGCTGCTCGCCTGCTTCGGCCTG GCCGAGCGCGGCCACGAAACCACGCCGCAGCTTGCGCAGTTCGCCTCGATCGCGATGCTGGTCTACGGTTTGGTGCGGAT CACCGACAAGCCGCTGCACGGCGCCGCCTGGTGGGGCGCGGCGGTCGGCCTGTTGCTGCTGTCGGGCAATCCGGTGCTGA CGGGCGCGCTGGTGCTCGGCACCGCGGTGCTGATCGCCGTCACGCCCGAGGTGCGCCATCGCCACCTGGCGCTCGTCGGC CTGCCGATCGCGATCGTGCTGTTCGCGCTGTGGCCCGCGGCGGCGCTGACGCTCTACCCCGGCGACGCGTCCTGGTTCCT CGATCAGTGGATGCACGGCAGCCTGATGCGCTTCTCGGGACCGCCCACGGCCGTGCTCAAGTATGCGGCGAAGAATCTGC CGCTGTTCACCTGGCCTGCCTGGCCGCTCGCGATCTGGGCGTGGATCAGTTGGAAGGGCTGGCGCCGCCGGCCGCACATC GCGATTCCGCTCGCCGTCGCCGCGCCGCTCGTCGCGCTCGTGATCCTGCAGAGCCAGCAGACCAATCGCGTCTACATGCT GCTGCTGCCGCCGCTCGCGGTGCTCGCGAGCTTCGCGCTGCCCACGCTCAAGCGCGGCGCGATCAACGCGATCGACTGGT TCGCCGTATTGAGCTTCACGATCCTCGGCAGCTTCGTCTGGCTGGTCTGGCTCGCCTCGATCACGGGCTTTCCGCATCCG CTCGCGCGCAACCTGGGCCGCCTCGTGCCCGGCTACGTGCCGCATTTCAACGCGCTCGCGTTCGCCTGCGCGCTGATCGC CACGGCCTGCTGGTTCATGCTGGTGCGCTGGCGCATCTCGCGGCAGCCGAAGGTGCTGTGGCGCAGCGTGGTGCTGTCGG GCGCGGGCACCACGCTGATGTGGGTGCTGCTGATGACGCTGTGGCTGCCGTTCGTGAACTACAGCCGCACCTATCGCGAC GTCGCGATGCAGATCGCCGCGCACCTGCCGGCCGACTACGAATGCATCTCGCCGGTGCGGCTCGGCGATGCGCAGATCGC GACCTTCGCCTATTTCGGCAAGATGCACTTCTCGTTCACCGACGACTGCGACTTGATCCTGCGCCAGGATGCCGCCGACT ACGGCGATCCGAGCTCGATGTCCCAATACGTCTGGCGGCTGGTCTGGGAGGGCCGCCGCGCGGCCGACCGCGACGAGCGC TTCCGCCTCTACGAGCGGATCGAGCGGCCCCGCTCGCCGCTACGACGCCATCCACGCGGCGCGCGCGGCTGA
Upstream 100 bases:
>100_bases GCACCGCCCGCGCGCAGCGTCTACAATGCCGGATGCTCGCAAGTCGGCCGTGCCAGCCGACGCCGGCCAAGCGCCTCCTC ATAACAAGTCAGTCATCTGC
Downstream 100 bases:
>100_bases CCATGCTCGCCGACGTCCGCCGCATCGCCGGCCTCGCCTGGCCGGTGCTGGTCGGCCAGCTCGCCATCATCGCGTTCGGC GTGATCGACACCGCGATGGT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Transmembrane Protein; Glycosyl Transferase Family Protein; Inner Membrane Protein; Glycosyltransferase; Glycosyl Transferase Family; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKPVVRLTASATRALPRWLLLTLCLVYAAFGLFGRDPWKNEDAAGFGVMWTMAGGSAHDWLLPNLVGKFVTSDGPLGYWL GALGIRAFGAWFDASNASRLATCVLFCVACAFVWSTAYLLGRRAEVQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGL AERGHETTPQLAQFASIAMLVYGLVRITDKPLHGAAWWGAAVGLLLLSGNPVLTGALVLGTAVLIAVTPEVRHRHLALVG LPIAIVLFALWPAAALTLYPGDASWFLDQWMHGSLMRFSGPPTAVLKYAAKNLPLFTWPAWPLAIWAWISWKGWRRRPHI AIPLAVAAPLVALVILQSQQTNRVYMLLLPPLAVLASFALPTLKRGAINAIDWFAVLSFTILGSFVWLVWLASITGFPHP LARNLGRLVPGYVPHFNALAFACALIATACWFMLVRWRISRQPKVLWRSVVLSGAGTTLMWVLLMTLWLPFVNYSRTYRD VAMQIAAHLPADYECISPVRLGDAQIATFAYFGKMHFSFTDDCDLILRQDAADYGDPSSMSQYVWRLVWEGRRAADRDER FRLYERIERPRSPLRRHPRGARG
Sequences:
>Translated_583_residues MKPVVRLTASATRALPRWLLLTLCLVYAAFGLFGRDPWKNEDAAGFGVMWTMAGGSAHDWLLPNLVGKFVTSDGPLGYWL GALGIRAFGAWFDASNASRLATCVLFCVACAFVWSTAYLLGRRAEVQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGL AERGHETTPQLAQFASIAMLVYGLVRITDKPLHGAAWWGAAVGLLLLSGNPVLTGALVLGTAVLIAVTPEVRHRHLALVG LPIAIVLFALWPAAALTLYPGDASWFLDQWMHGSLMRFSGPPTAVLKYAAKNLPLFTWPAWPLAIWAWISWKGWRRRPHI AIPLAVAAPLVALVILQSQQTNRVYMLLLPPLAVLASFALPTLKRGAINAIDWFAVLSFTILGSFVWLVWLASITGFPHP LARNLGRLVPGYVPHFNALAFACALIATACWFMLVRWRISRQPKVLWRSVVLSGAGTTLMWVLLMTLWLPFVNYSRTYRD VAMQIAAHLPADYECISPVRLGDAQIATFAYFGKMHFSFTDDCDLILRQDAADYGDPSSMSQYVWRLVWEGRRAADRDER FRLYERIERPRSPLRRHPRGARG >Mature_583_residues MKPVVRLTASATRALPRWLLLTLCLVYAAFGLFGRDPWKNEDAAGFGVMWTMAGGSAHDWLLPNLVGKFVTSDGPLGYWL GALGIRAFGAWFDASNASRLATCVLFCVACAFVWSTAYLLGRRAEVQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGL AERGHETTPQLAQFASIAMLVYGLVRITDKPLHGAAWWGAAVGLLLLSGNPVLTGALVLGTAVLIAVTPEVRHRHLALVG LPIAIVLFALWPAAALTLYPGDASWFLDQWMHGSLMRFSGPPTAVLKYAAKNLPLFTWPAWPLAIWAWISWKGWRRRPHI AIPLAVAAPLVALVILQSQQTNRVYMLLLPPLAVLASFALPTLKRGAINAIDWFAVLSFTILGSFVWLVWLASITGFPHP LARNLGRLVPGYVPHFNALAFACALIATACWFMLVRWRISRQPKVLWRSVVLSGAGTTLMWVLLMTLWLPFVNYSRTYRD VAMQIAAHLPADYECISPVRLGDAQIATFAYFGKMHFSFTDDCDLILRQDAADYGDPSSMSQYVWRLVWEGRRAADRDER FRLYERIERPRSPLRRHPRGARG
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64744; Mature: 64744
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVVRLTASATRALPRWLLLTLCLVYAAFGLFGRDPWKNEDAAGFGVMWTMAGGSAHDW CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC LLPNLVGKFVTSDGPLGYWLGALGIRAFGAWFDASNASRLATCVLFCVACAFVWSTAYLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GRRAEVQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFASIAML CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VYGLVRITDKPLHGAAWWGAAVGLLLLSGNPVLTGALVLGTAVLIAVTPEVRHRHLALVG HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHH LPIAIVLFALWPAAALTLYPGDASWFLDQWMHGSLMRFSGPPTAVLKYAAKNLPLFTWPA HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCEEECCC WPLAIWAWISWKGWRRRPHIAIPLAVAAPLVALVILQSQQTNRVYMLLLPPLAVLASFAL HHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH PTLKRGAINAIDWFAVLSFTILGSFVWLVWLASITGFPHPLARNLGRLVPGYVPHFNALA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH FACALIATACWFMLVRWRISRQPKVLWRSVVLSGAGTTLMWVLLMTLWLPFVNYSRTYRD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VAMQIAAHLPADYECISPVRLGDAQIATFAYFGKMHFSFTDDCDLILRQDAADYGDPSSM HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCEECCCCCCHHHHHHHCCCCCCCHHHH SQYVWRLVWEGRRAADRDERFRLYERIERPRSPLRRHPRGARG HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure MKPVVRLTASATRALPRWLLLTLCLVYAAFGLFGRDPWKNEDAAGFGVMWTMAGGSAHDW CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC LLPNLVGKFVTSDGPLGYWLGALGIRAFGAWFDASNASRLATCVLFCVACAFVWSTAYLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GRRAEVQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFASIAML CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VYGLVRITDKPLHGAAWWGAAVGLLLLSGNPVLTGALVLGTAVLIAVTPEVRHRHLALVG HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHH LPIAIVLFALWPAAALTLYPGDASWFLDQWMHGSLMRFSGPPTAVLKYAAKNLPLFTWPA HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCEEECCC WPLAIWAWISWKGWRRRPHIAIPLAVAAPLVALVILQSQQTNRVYMLLLPPLAVLASFAL HHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH PTLKRGAINAIDWFAVLSFTILGSFVWLVWLASITGFPHPLARNLGRLVPGYVPHFNALA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH FACALIATACWFMLVRWRISRQPKVLWRSVVLSGAGTTLMWVLLMTLWLPFVNYSRTYRD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VAMQIAAHLPADYECISPVRLGDAQIATFAYFGKMHFSFTDDCDLILRQDAADYGDPSSM HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCEECCCCCCHHHHHHHCCCCCCCHHHH SQYVWRLVWEGRRAADRDERFRLYERIERPRSPLRRHPRGARG HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA