Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is rpmE2 [H]

Identifier: 238027050

GI number: 238027050

Start: 1573615

End: 1573875

Strand: Reverse

Name: rpmE2 [H]

Synonym: bglu_1g14290

Alternate gene names: 238027050

Gene position: 1573875-1573615 (Counterclockwise)

Preceding gene: 238027051

Following gene: 238027049

Centisome position: 40.29

GC content: 59.0

Gene sequence:

>261_bases
ATGAAACCGGGCATCCATCCGAATTACCGCGAAGTCGTCTTCCAGGACATGTCGAACGGCTTCAAGTTCATCACGCGCTC
GACCATCCAGACGCGCGAAACGATCGAACTCGACGGCAAGACCTACCCGCTCGCCAAGATCGAAGTGTCGTCGGAGTCGC
ACTCGTTCTACACGGGCCAGCAGAAGATCATGGACACGGCCGGCCGTGTCGAGAAGTTCAAGAACAAGTTCGGCGCGCGC
GCCAACGGCAAGGCGGCGTAA

Upstream 100 bases:

>100_bases
CGTCGTTTTTCGACCTAAGGCAAGTGGCTCGCAACGGCGCAGCGTCCGGTTCGACGGATTCGCGCGGCGGGTTGGCTACC
GCTCCATTACAGGAAACATC

Downstream 100 bases:

>100_bases
GCTCGCCGCGCGATACCGGCGGCGGCATCGCCGGTTCGAACCAAAAGGGCAGCCCAGGCTGCCCTTTTTTCGTCTGCGCG
CTTGCGGCACCGCCCGCGCG

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKPGIHPNYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQQKIMDTAGRVEKFKNKFGAR
ANGKAA

Sequences:

>Translated_86_residues
MKPGIHPNYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQQKIMDTAGRVEKFKNKFGAR
ANGKAA
>Mature_86_residues
MKPGIHPNYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQQKIMDTAGRVEKFKNKFGAR
ANGKAA

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367109, Length=78, Percent_Identity=52.5641025641026, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 9731; Mature: 9731

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGIHPNYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQ
CCCCCCCCHHHHHHHHHCCCCEEEHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEECCH
QKIMDTAGRVEKFKNKFGARANGKAA
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKPGIHPNYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQ
CCCCCCCCHHHHHHHHHCCCCEEEHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEECCH
QKIMDTAGRVEKFKNKFGARANGKAA
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA