| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026998
Identifier: 238026998
GI number: 238026998
Start: 1518077
End: 1518922
Strand: Reverse
Name: 238026998
Synonym: bglu_1g13760
Alternate gene names: NA
Gene position: 1518922-1518077 (Counterclockwise)
Preceding gene: 339905963
Following gene: 238026991
Centisome position: 38.88
GC content: 73.29
Gene sequence:
>846_bases ATGTGCCTGATCGTATTCGACTGGCAGCCCGAGGCCGAAAGCGGCCCGATGCTGACGCTCACCGCGAACCGTGACGAATT CCTGCGCCGCACCAGCGCGCCGCTCGCCTGGTGGGAGGATCTGCCCGGCGTGCTGGCCGGCCGCGACCTCGAAGGCGGCG GCACCTGGCTGGGCGTATCGCGCGACGGCCGCTTCGCCGCCCTCACCAACTACCGCGCGCCGTTCGACATCCGCGCCGGC GCGCCCACGCGCGGCCGGCTCGTGTCCGACTTCCTCGGCGCTCGCAACCTCGCGCCGCTCGCGTACCTGCAGCAGATCGC CGGCACCGCCGCGCTCTACAACGGCTTCAACCTGCTGGTCGGCGATTGCCGGCGGCGCGAGCTGGCCTGGTTCTGCAACC GGCCGGCCGAGCCCGACACCGCGCTCGAGGCGCCGCTGCTGGTCGGCGCCGGCCTGCACGGGCTGTCGAACGCGCGGCTC GACACGCCCTGGCCGAAGCTCGTGCACAAGCGCAGCGAACTCGGCACGCTGCTGACCTACGAGGCCGCGCCGCCGCTCGA CGCGCTGATCGAGATCATGCGCGACCCACGCAGGGCCGACGACGACGCGCTGCCGCGCACCGGCATCCCGCTCGAACGCG AGCGTGCGCTGTCGGCCGCCTTCATCGAGACGCCCGAATACGGCACGCGCGGCACCACCGCGCTGCGCGTGACGCAGAAG GAAGGCGCGCGGCTGTCGGTCGAGATCAAGGAGCGCTGCGACGACGACGGCTCGCACCGGATCGTGCGGCCCGGCGCGTT CGAGCGCGCGATGCACTTCGACGTCGCGCTGGGCGGCGCGCGCTAG
Upstream 100 bases:
>100_bases ACCGAAGTCTGAGCCCGCATGCTATCGTGGCGCGCGAAGCCGGCGCGCCGCGCTCGGGTGCCGGCTTCGCGCACCCCGAT CCCAGCGAGGGAATCTCCCG
Downstream 100 bases:
>100_bases CCGGGCGGCGCCGGCGCGCGGCGCGCCGTTCAGACCGCGTCGAACGCCTCGCGCAACGCGCCGGCCGCGTCGGCGTGCGC CTGCCGGACCTCGGGGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVSRDGRFAALTNYRAPFDIRAG APTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLVGDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARL DTPWPKLVHKRSELGTLLTYEAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR
Sequences:
>Translated_281_residues MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVSRDGRFAALTNYRAPFDIRAG APTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLVGDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARL DTPWPKLVHKRSELGTLLTYEAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR >Mature_281_residues MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVSRDGRFAALTNYRAPFDIRAG APTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLVGDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARL DTPWPKLVHKRSELGTLLTYEAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR
Specific function: Unknown
COG id: COG3332
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190570176, Length=284, Percent_Identity=33.8028169014084, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI17563216, Length=258, Percent_Identity=26.3565891472868, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30900; Mature: 30900
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVS CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHCCHHHCCCCCCCCCCEEEEC RDGRFAALTNYRAPFDIRAGAPTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLV CCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE GDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARLDTPWPKLVHKRSELGTLLTY CCHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCEEEEE EAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEECC EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR CCCEEEEEEHHHCCCCCCCEEECCCHHHHHEEEEEEECCCC >Mature Secondary Structure MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVS CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHCCHHHCCCCCCCCCCEEEEC RDGRFAALTNYRAPFDIRAGAPTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLV CCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE GDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARLDTPWPKLVHKRSELGTLLTY CCHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCEEEEE EAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEECC EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR CCCEEEEEEHHHCCCCCCCEEECCCHHHHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA