Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026998

Identifier: 238026998

GI number: 238026998

Start: 1518077

End: 1518922

Strand: Reverse

Name: 238026998

Synonym: bglu_1g13760

Alternate gene names: NA

Gene position: 1518922-1518077 (Counterclockwise)

Preceding gene: 339905963

Following gene: 238026991

Centisome position: 38.88

GC content: 73.29

Gene sequence:

>846_bases
ATGTGCCTGATCGTATTCGACTGGCAGCCCGAGGCCGAAAGCGGCCCGATGCTGACGCTCACCGCGAACCGTGACGAATT
CCTGCGCCGCACCAGCGCGCCGCTCGCCTGGTGGGAGGATCTGCCCGGCGTGCTGGCCGGCCGCGACCTCGAAGGCGGCG
GCACCTGGCTGGGCGTATCGCGCGACGGCCGCTTCGCCGCCCTCACCAACTACCGCGCGCCGTTCGACATCCGCGCCGGC
GCGCCCACGCGCGGCCGGCTCGTGTCCGACTTCCTCGGCGCTCGCAACCTCGCGCCGCTCGCGTACCTGCAGCAGATCGC
CGGCACCGCCGCGCTCTACAACGGCTTCAACCTGCTGGTCGGCGATTGCCGGCGGCGCGAGCTGGCCTGGTTCTGCAACC
GGCCGGCCGAGCCCGACACCGCGCTCGAGGCGCCGCTGCTGGTCGGCGCCGGCCTGCACGGGCTGTCGAACGCGCGGCTC
GACACGCCCTGGCCGAAGCTCGTGCACAAGCGCAGCGAACTCGGCACGCTGCTGACCTACGAGGCCGCGCCGCCGCTCGA
CGCGCTGATCGAGATCATGCGCGACCCACGCAGGGCCGACGACGACGCGCTGCCGCGCACCGGCATCCCGCTCGAACGCG
AGCGTGCGCTGTCGGCCGCCTTCATCGAGACGCCCGAATACGGCACGCGCGGCACCACCGCGCTGCGCGTGACGCAGAAG
GAAGGCGCGCGGCTGTCGGTCGAGATCAAGGAGCGCTGCGACGACGACGGCTCGCACCGGATCGTGCGGCCCGGCGCGTT
CGAGCGCGCGATGCACTTCGACGTCGCGCTGGGCGGCGCGCGCTAG

Upstream 100 bases:

>100_bases
ACCGAAGTCTGAGCCCGCATGCTATCGTGGCGCGCGAAGCCGGCGCGCCGCGCTCGGGTGCCGGCTTCGCGCACCCCGAT
CCCAGCGAGGGAATCTCCCG

Downstream 100 bases:

>100_bases
CCGGGCGGCGCCGGCGCGCGGCGCGCCGTTCAGACCGCGTCGAACGCCTCGCGCAACGCGCCGGCCGCGTCGGCGTGCGC
CTGCCGGACCTCGGGGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVSRDGRFAALTNYRAPFDIRAG
APTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLVGDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARL
DTPWPKLVHKRSELGTLLTYEAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK
EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR

Sequences:

>Translated_281_residues
MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVSRDGRFAALTNYRAPFDIRAG
APTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLVGDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARL
DTPWPKLVHKRSELGTLLTYEAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK
EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR
>Mature_281_residues
MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVSRDGRFAALTNYRAPFDIRAG
APTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLVGDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARL
DTPWPKLVHKRSELGTLLTYEAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK
EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=284, Percent_Identity=33.8028169014084, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17563216, Length=258, Percent_Identity=26.3565891472868, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30900; Mature: 30900

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVS
CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHCCHHHCCCCCCCCCCEEEEC
RDGRFAALTNYRAPFDIRAGAPTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLV
CCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE
GDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARLDTPWPKLVHKRSELGTLLTY
CCHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCEEEEE
EAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEECC
EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR
CCCEEEEEEHHHCCCCCCCEEECCCHHHHHEEEEEEECCCC
>Mature Secondary Structure
MCLIVFDWQPEAESGPMLTLTANRDEFLRRTSAPLAWWEDLPGVLAGRDLEGGGTWLGVS
CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHCCHHHCCCCCCCCCCEEEEC
RDGRFAALTNYRAPFDIRAGAPTRGRLVSDFLGARNLAPLAYLQQIAGTAALYNGFNLLV
CCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE
GDCRRRELAWFCNRPAEPDTALEAPLLVGAGLHGLSNARLDTPWPKLVHKRSELGTLLTY
CCHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCEEEEE
EAAPPLDALIEIMRDPRRADDDALPRTGIPLERERALSAAFIETPEYGTRGTTALRVTQK
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEECC
EGARLSVEIKERCDDDGSHRIVRPGAFERAMHFDVALGGAR
CCCEEEEEEHHHCCCCCCCEEECCCHHHHHEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA