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The map label for this gene is ydiU [C]

Identifier: 238026991

GI number: 238026991

Start: 1508437

End: 1510002

Strand: Reverse

Name: ydiU [C]

Synonym: bglu_1g13690

Alternate gene names: 238026991

Gene position: 1510002-1508437 (Counterclockwise)

Preceding gene: 238026998

Following gene: 238026990

Centisome position: 38.65

GC content: 71.26

Gene sequence:

>1566_bases
TTGGCCGCCTCCCTCCCCGCCGCTTCCGCCGCTGCCGCCCTTGCCGATCTGGCCGCCTCGCTCGCCGCGCCGCGCGACGA
CGCGTTCGTCGGGCTCGGCCCCGCGTTCCTGACCCGGCTGCCCGCGGCACCGCTGCCCGCGCCCTACGTGATCGGCTTTT
CCGACGAGCTCGCGCGCGAGCTCGGCCTCGATCCGTCGATCCGCGCGCTGCCCGGCTTCGCCGAGCTGTTCTGCGGCAAC
CCCACGCGCGACTGGCCCGCCGCGGCCCTGCCCTACGCGACCGTCTATTCGGGCCACCAGTTCGGCGTCTGGGCCGGCCA
GCTCGGCGACGGCCGCGCGCTGACGATCGGCGAGCTCGAGCACGCGGGCCGGCGCGTCGAATTCCAGCTGAAGGGCGCGG
GCCGCACGCCGTATTCGCGCATGGGCGACGGCCGCGCGGTGCTGCGCTCGTCGATCCGCGAATTCCTCTGCTCGGAGGCG
ATGCATCACCTCGGCATCCCGACCACGCGCGCGCTGGCGCTGATCGGCTCGGACCAACCGGTCACGCGCGAGGAGATCGA
AACGGCGGCCGTGGTCACGCGCGTGGCGGACAGCTTCGTGCGCTTCGGCCATTTCGAGCACTTCTTCGCCAACGACCGGC
CCGACCTGCTCAAGCAGCTCGCCGATCACGTCATCGCGCGCTTCTATCCGGACTGCCGCGCCGCGGACGACCCGTATCTG
GCGCTGCTCGAGGCCGTGATGCAGCGCACCGCGCGAATGCTGGCCCAGTGGCAGGCGGTGGGCTTCTGCCACGGCGTGAT
GAACACCGACAACATGTCGATCCTCGGTCTCACGCTCGACTACGGCCCGTTCGGCTTCATCGACGGCTTCGACGCCTCGC
ACATCTGCAACCACACCGACACGCAGGGTCGCTACGCGTACCGCATGCAGCCGCGCATCGCGCACTGGAACTGCTTCTGC
CTGGCCCAGGCGCTGCTGCCGCTGATCGGCCAGCAGCGCACCGAGCTAGACGACGATCCGCGCACCGAGCGCGCGGTGGA
AGACGCCCAGGCCGTGCTGGCACGCTTTCCCGAGACGTTCGGCCCCGCGCTCGAGGCCGCGATGCGCGCCAAGCTCGGCC
TCGCGCTCGAACTCGAAGGCGACGCCGCGCTCGCCAACCGGCTGCTGGAAATCATGAACGGCAGCCGTGCCGACTTCACG
CTGACGTTCCGCCGCCTCGCGCACCTGTCGAAGCACGACGCGCGCGCGGACGGCGCGGTGCGCGACCTGTTCATCGACCG
CGCGGCGTTCGACGGCTGGGCCGCGCAGTATCGCGAGCGCCTGGCCGCCGAGCCGCGCGACGACGCGGCGCGCGCCGAGG
CGATGAACCGCGTCAATCCGAAATACGTGCTGCGCAATCATCTGGCCGAGACCGCGATCCGGCGCGCGGCCGAGAAGGAT
TTTTCCGAGCTCGAACGGCTCGCCCGCATCCTGCGCAGGCCGTTCGACGAACAGCCCGAGTACGAGGCCTACGCCGCGCT
GCCGCCCGACTGGGCGAGCACGCTGGAAGTGAGCTGCTCGTCGTAA

Upstream 100 bases:

>100_bases
TGGTCGGGTCCGCGGCCGCAAGCGGCCCGCGCGGCGCGGATTTACAATATCGGCTTGTGCCCCGTTGTTCAACTCGTTGT
TTCCAGGAAACGAACCCGCC

Downstream 100 bases:

>100_bases
CGAGCGAACCTGCCGCCTTCTCCAGGAGAACCCCACCATGCCCCACGATCAGGACGACCGCCGCTATCCGTACCAGGCCG
ACGACGCCGAACTGCGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MAASLPAASAAAALADLAASLAAPRDDAFVGLGPAFLTRLPAAPLPAPYVIGFSDELARELGLDPSIRALPGFAELFCGN
PTRDWPAAALPYATVYSGHQFGVWAGQLGDGRALTIGELEHAGRRVEFQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEA
MHHLGIPTTRALALIGSDQPVTREEIETAAVVTRVADSFVRFGHFEHFFANDRPDLLKQLADHVIARFYPDCRAADDPYL
ALLEAVMQRTARMLAQWQAVGFCHGVMNTDNMSILGLTLDYGPFGFIDGFDASHICNHTDTQGRYAYRMQPRIAHWNCFC
LAQALLPLIGQQRTELDDDPRTERAVEDAQAVLARFPETFGPALEAAMRAKLGLALELEGDAALANRLLEIMNGSRADFT
LTFRRLAHLSKHDARADGAVRDLFIDRAAFDGWAAQYRERLAAEPRDDAARAEAMNRVNPKYVLRNHLAETAIRRAAEKD
FSELERLARILRRPFDEQPEYEAYAALPPDWASTLEVSCSS

Sequences:

>Translated_521_residues
MAASLPAASAAAALADLAASLAAPRDDAFVGLGPAFLTRLPAAPLPAPYVIGFSDELARELGLDPSIRALPGFAELFCGN
PTRDWPAAALPYATVYSGHQFGVWAGQLGDGRALTIGELEHAGRRVEFQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEA
MHHLGIPTTRALALIGSDQPVTREEIETAAVVTRVADSFVRFGHFEHFFANDRPDLLKQLADHVIARFYPDCRAADDPYL
ALLEAVMQRTARMLAQWQAVGFCHGVMNTDNMSILGLTLDYGPFGFIDGFDASHICNHTDTQGRYAYRMQPRIAHWNCFC
LAQALLPLIGQQRTELDDDPRTERAVEDAQAVLARFPETFGPALEAAMRAKLGLALELEGDAALANRLLEIMNGSRADFT
LTFRRLAHLSKHDARADGAVRDLFIDRAAFDGWAAQYRERLAAEPRDDAARAEAMNRVNPKYVLRNHLAETAIRRAAEKD
FSELERLARILRRPFDEQPEYEAYAALPPDWASTLEVSCSS
>Mature_520_residues
AASLPAASAAAALADLAASLAAPRDDAFVGLGPAFLTRLPAAPLPAPYVIGFSDELARELGLDPSIRALPGFAELFCGNP
TRDWPAAALPYATVYSGHQFGVWAGQLGDGRALTIGELEHAGRRVEFQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEAM
HHLGIPTTRALALIGSDQPVTREEIETAAVVTRVADSFVRFGHFEHFFANDRPDLLKQLADHVIARFYPDCRAADDPYLA
LLEAVMQRTARMLAQWQAVGFCHGVMNTDNMSILGLTLDYGPFGFIDGFDASHICNHTDTQGRYAYRMQPRIAHWNCFCL
AQALLPLIGQQRTELDDDPRTERAVEDAQAVLARFPETFGPALEAAMRAKLGLALELEGDAALANRLLEIMNGSRADFTL
TFRRLAHLSKHDARADGAVRDLFIDRAAFDGWAAQYRERLAAEPRDDAARAEAMNRVNPKYVLRNHLAETAIRRAAEKDF
SELERLARILRRPFDEQPEYEAYAALPPDWASTLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=401, Percent_Identity=46.8827930174564, Blast_Score=306, Evalue=4e-83,
Organism=Escherichia coli, GI1787999, Length=494, Percent_Identity=47.165991902834, Blast_Score=418, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6325034, Length=402, Percent_Identity=34.8258706467662, Blast_Score=212, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 57308; Mature: 57177

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASLPAASAAAALADLAASLAAPRDDAFVGLGPAFLTRLPAAPLPAPYVIGFSDELARE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCEEECCCHHHHHH
LGLDPSIRALPGFAELFCGNPTRDWPAAALPYATVYSGHQFGVWAGQLGDGRALTIGELE
HCCCCCHHHCCCHHHHHCCCCCCCCCCHHCCHHHHCCCCEECEEECCCCCCCEEEEHHHH
HAGRRVEFQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALALIGSDQP
HCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCC
VTREEIETAAVVTRVADSFVRFGHFEHFFANDRPDLLKQLADHVIARFYPDCRAADDPYL
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
ALLEAVMQRTARMLAQWQAVGFCHGVMNTDNMSILGLTLDYGPFGFIDGFDASHICNHTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCC
TQGRYAYRMQPRIAHWNCFCLAQALLPLIGQQRTELDDDPRTERAVEDAQAVLARFPETF
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
GPALEAAMRAKLGLALELEGDAALANRLLEIMNGSRADFTLTFRRLAHLSKHDARADGAV
HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHH
RDLFIDRAAFDGWAAQYRERLAAEPRDDAARAEAMNRVNPKYVLRNHLAETAIRRAAEKD
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FSELERLARILRRPFDEQPEYEAYAALPPDWASTLEVSCSS
HHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEECCC
>Mature Secondary Structure 
AASLPAASAAAALADLAASLAAPRDDAFVGLGPAFLTRLPAAPLPAPYVIGFSDELARE
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCEEECCCHHHHHH
LGLDPSIRALPGFAELFCGNPTRDWPAAALPYATVYSGHQFGVWAGQLGDGRALTIGELE
HCCCCCHHHCCCHHHHHCCCCCCCCCCHHCCHHHHCCCCEECEEECCCCCCCEEEEHHHH
HAGRRVEFQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALALIGSDQP
HCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCC
VTREEIETAAVVTRVADSFVRFGHFEHFFANDRPDLLKQLADHVIARFYPDCRAADDPYL
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
ALLEAVMQRTARMLAQWQAVGFCHGVMNTDNMSILGLTLDYGPFGFIDGFDASHICNHTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCC
TQGRYAYRMQPRIAHWNCFCLAQALLPLIGQQRTELDDDPRTERAVEDAQAVLARFPETF
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
GPALEAAMRAKLGLALELEGDAALANRLLEIMNGSRADFTLTFRRLAHLSKHDARADGAV
HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHH
RDLFIDRAAFDGWAAQYRERLAAEPRDDAARAEAMNRVNPKYVLRNHLAETAIRRAAEKD
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FSELERLARILRRPFDEQPEYEAYAALPPDWASTLEVSCSS
HHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA