| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 238026907
GI number: 238026907
Start: 1399736
End: 1400569
Strand: Direct
Name: cdsA [H]
Synonym: bglu_1g12770
Alternate gene names: 238026907
Gene position: 1399736-1400569 (Clockwise)
Preceding gene: 238026906
Following gene: 238026908
Centisome position: 35.83
GC content: 73.5
Gene sequence:
>834_bases ATGCTGAAGACCCGCGTCATCACGGCGGTCGTGCTGCTGGCAGTGCTGCTGCCGGTCACGCTGTTCGCGCCGCTCGCGGC GTTCGGCGCACTGATCGCGCTGGTGCTCGTGTTCGCGGCCTGGGAGTGGGCGCGGCTGCTCAAGCTCGGCGCGGCCGGCT CGGTGATCTACGCGATCGTCGCGGCGCTCGCGCTCGGCGCCAGCATGCGGCTCGGGGGCGGACCGGGCGCCGGCTTCGGG CCGTCGCGGCCGCTCGTCGAGGCCGCCGCGGTATTCTGGCTGCTGGCCGGGCCGTTCGCGCTGTGGCGCAAGCCGGCGCT GGCCGGGCGCGCCTGGCGACCGTTCCTGCTCGCGGCCGGGCTGGTGGTGTTCGCCGCCTGCTGGCACGCGGTGGTGGCCG CGCGCGCGGCCGGCATCGCGTTCGTGCTGTCGATGTTGCTGGTGGTGTGGCTCGCCGATATCGGCGCATACTTCGCGGGC AAGGCGTTCGGCCGGCACAAGCTGGCCCCGTCGATCAGCCCGGGCAAGACCTGGGAGGGCGCGCTGGGCGGCTGGCTCGC CGTGATGATGGTGGCCGGCCTCGCAATTGCCCTCGACGCGTCCGGGGCGACCCTGTATGCGGCGCTCGCCGAGCGCTTCG GCGTGGCGGGCGCGCTCGCTGCGCTGACCCTGCTGGTGGCCTACAGCGTGGTTGGCGACCTGTTCGAATCGCTGCTCAAG CGTCAGGCCGGCGTGAAGGATTCGAGCGGCCTGCTGCCGGGCCACGGCGGCGTGCTCGACCGTGTCGACGCGTTGCTGCC GGTGCTGCCGCTCGCCGTGCTGCTGCTCGGTTAA
Upstream 100 bases:
>100_bases CGCTCGCCGATGCGATGGCGTCCTACACCGACCGCGAGCGCCGCTTCGGGCGGACCAGCGCGCAGCTCGAACCTCAATCG CAGGACGTCGATTCCCTTTC
Downstream 100 bases:
>100_bases ACACTAGACCCTCATTATGCAAAAACGCCTGACTATCCTCGGTTCGACGGGTTCGATCGGAGACAGCACGCTCGATGTCG TCGCGCGGCACCCGGACCGC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIVAALALGASMRLGGGPGAGFG PSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAGLVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAG KAFGRHKLAPSISPGKTWEGALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG
Sequences:
>Translated_277_residues MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIVAALALGASMRLGGGPGAGFG PSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAGLVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAG KAFGRHKLAPSISPGKTWEGALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG >Mature_277_residues MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIVAALALGASMRLGGGPGAGFG PSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAGLVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAG KAFGRHKLAPSISPGKTWEGALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=299, Percent_Identity=34.1137123745819, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787677, Length=121, Percent_Identity=41.3223140495868, Blast_Score=84, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28305; Mature: 28305
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AALALGASMRLGGGPGAGFGPSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAG HHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHH LVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAGKAFGRHKLAPSISPGKTWEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH ALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AALALGASMRLGGGPGAGFGPSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAG HHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHH LVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAGKAFGRHKLAPSISPGKTWEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH ALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8654980; 10984043 [H]