Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is cdsA [H]

Identifier: 238026907

GI number: 238026907

Start: 1399736

End: 1400569

Strand: Direct

Name: cdsA [H]

Synonym: bglu_1g12770

Alternate gene names: 238026907

Gene position: 1399736-1400569 (Clockwise)

Preceding gene: 238026906

Following gene: 238026908

Centisome position: 35.83

GC content: 73.5

Gene sequence:

>834_bases
ATGCTGAAGACCCGCGTCATCACGGCGGTCGTGCTGCTGGCAGTGCTGCTGCCGGTCACGCTGTTCGCGCCGCTCGCGGC
GTTCGGCGCACTGATCGCGCTGGTGCTCGTGTTCGCGGCCTGGGAGTGGGCGCGGCTGCTCAAGCTCGGCGCGGCCGGCT
CGGTGATCTACGCGATCGTCGCGGCGCTCGCGCTCGGCGCCAGCATGCGGCTCGGGGGCGGACCGGGCGCCGGCTTCGGG
CCGTCGCGGCCGCTCGTCGAGGCCGCCGCGGTATTCTGGCTGCTGGCCGGGCCGTTCGCGCTGTGGCGCAAGCCGGCGCT
GGCCGGGCGCGCCTGGCGACCGTTCCTGCTCGCGGCCGGGCTGGTGGTGTTCGCCGCCTGCTGGCACGCGGTGGTGGCCG
CGCGCGCGGCCGGCATCGCGTTCGTGCTGTCGATGTTGCTGGTGGTGTGGCTCGCCGATATCGGCGCATACTTCGCGGGC
AAGGCGTTCGGCCGGCACAAGCTGGCCCCGTCGATCAGCCCGGGCAAGACCTGGGAGGGCGCGCTGGGCGGCTGGCTCGC
CGTGATGATGGTGGCCGGCCTCGCAATTGCCCTCGACGCGTCCGGGGCGACCCTGTATGCGGCGCTCGCCGAGCGCTTCG
GCGTGGCGGGCGCGCTCGCTGCGCTGACCCTGCTGGTGGCCTACAGCGTGGTTGGCGACCTGTTCGAATCGCTGCTCAAG
CGTCAGGCCGGCGTGAAGGATTCGAGCGGCCTGCTGCCGGGCCACGGCGGCGTGCTCGACCGTGTCGACGCGTTGCTGCC
GGTGCTGCCGCTCGCCGTGCTGCTGCTCGGTTAA

Upstream 100 bases:

>100_bases
CGCTCGCCGATGCGATGGCGTCCTACACCGACCGCGAGCGCCGCTTCGGGCGGACCAGCGCGCAGCTCGAACCTCAATCG
CAGGACGTCGATTCCCTTTC

Downstream 100 bases:

>100_bases
ACACTAGACCCTCATTATGCAAAAACGCCTGACTATCCTCGGTTCGACGGGTTCGATCGGAGACAGCACGCTCGATGTCG
TCGCGCGGCACCCGGACCGC

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIVAALALGASMRLGGGPGAGFG
PSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAGLVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAG
KAFGRHKLAPSISPGKTWEGALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK
RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG

Sequences:

>Translated_277_residues
MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIVAALALGASMRLGGGPGAGFG
PSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAGLVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAG
KAFGRHKLAPSISPGKTWEGALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK
RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG
>Mature_277_residues
MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIVAALALGASMRLGGGPGAGFG
PSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAGLVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAG
KAFGRHKLAPSISPGKTWEGALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK
RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=299, Percent_Identity=34.1137123745819, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787677, Length=121, Percent_Identity=41.3223140495868, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 28305; Mature: 28305

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AALALGASMRLGGGPGAGFGPSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAG
HHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHH
LVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAGKAFGRHKLAPSISPGKTWEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
ALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALVLVFAAWEWARLLKLGAAGSVIYAIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AALALGASMRLGGGPGAGFGPSRPLVEAAAVFWLLAGPFALWRKPALAGRAWRPFLLAAG
HHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHH
LVVFAACWHAVVAARAAGIAFVLSMLLVVWLADIGAYFAGKAFGRHKLAPSISPGKTWEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
ALGGWLAVMMVAGLAIALDASGATLYAALAERFGVAGALAALTLLVAYSVVGDLFESLLK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQAGVKDSSGLLPGHGGVLDRVDALLPVLPLAVLLLG
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8654980; 10984043 [H]