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The map label for this gene is dxr [H]

Identifier: 238026908

GI number: 238026908

Start: 1400586

End: 1401782

Strand: Direct

Name: dxr [H]

Synonym: bglu_1g12780

Alternate gene names: 238026908

Gene position: 1400586-1401782 (Clockwise)

Preceding gene: 238026907

Following gene: 238026909

Centisome position: 35.85

GC content: 69.76

Gene sequence:

>1197_bases
ATGCAAAAACGCCTGACTATCCTCGGTTCGACGGGTTCGATCGGAGACAGCACGCTCGATGTCGTCGCGCGGCACCCGGA
CCGCTTTTCGGTGTATGCGCTGACCGCCCATCGCAACGGCGACAAGCTCGTCGAGCAGTGCCTGAGGTTCGCGCCCGAGG
TGGCCGTGGTCGGCGATGCCGCCACCGCCGCGCAGGTCGAGGCCAAGCTGCGCGCTGCCGGCAGCCGCACCCAGGTGGCC
TACGGGCCGGAGGCGCTGGTCCAGGTCGCCGGAGCGGGCGGCTGCGACACCGTGGTGGCCGCGATCGTCGGCGCGGCGGG
CCTGCCGTCGAGCCTCGCCGCCGCGCGTGCGGGCAAGCGGATTCTGCTGGCCAACAAGGAATCGCTGGTGATGTCGGGTT
CGATCTTCATGGACGCGGTGCGCGACCATGGCGCGAGCCTGCTGCCCGTGGACAGCGAGCACAACGCGATCTTCCAGTGC
ATGCCGCGCGACATCGCGGAGCACGGCGGGATCGAGAAGATCATCGTGACAGCCTCGGGCGGCCCGTTTCGTACCCGTGA
GCCGGCCACGCTCGCCGACGTGACGCCGGAGCAGGCCTGCAAGCATCCGAACTGGTCGATGGGCCGCAAGATCTCGGTCG
ATTCGGCCACCATGATGAACAAGGGTCTCGAGGTGATCGAGGCGCACTGGATCTTCGGGCTGCCGAGCAGCCGCATCGAC
GTGCTGATTCACCCGCAGAGCGTGATCCATTCGCTCGTCTCGTACAAGGACGGCTCGGTGCTCGCGCAGCTCGGCAACCC
CGACATGCGCACGCCGATCGCGCACGCGCTCGCGTTCCCCGAGCGCGTCGACGCCGGCGTCGCGCAGCTTGACCTGGCGC
AGATCGCCACGCTCACGTTCGAGCAGCCCGACCTCGAGCGCTTCCCGTGCCTCGCGCTGGCGATCCAGGCGCTCGACGCG
GGCGGCGTGGCGAGCACCGTGCTCAACGCCGCGAACGAGCTGGCGGTGGATGCCTTCCTCGAACGCCGGATCGGCTTCAT
GGACATCGCGCGCACGGTGGACGCGGTGCTCAACAGTCTGACCAATCGCGAGGCCGCCGGCCTCGACGACGTGCTCGCGG
CCGATGCCGAGGCGCGTCGCGCGGCAGCCGCGGTGATCGCTGGCCTGCCAGTTCCGCGCGCGGAGCGCGCAGCCTGA

Upstream 100 bases:

>100_bases
CTGCTGCCGGGCCACGGCGGCGTGCTCGACCGTGTCGACGCGTTGCTGCCGGTGCTGCCGCTCGCCGTGCTGCTGCTCGG
TTAAACACTAGACCCTCATT

Downstream 100 bases:

>100_bases
CCGAGAGGGGCGCATGAACGTGCTGATCGAGCTGGTGGCGTTTGCAGTGGCGATCGGCGTGCTGGTCGTCGTACACGAAT
ACGGGCATTACAGCGTCGCG

Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Products: NA

Alternate protein names: DXP reductoisomerase; 1-deoxyxylulose-5-phosphate reductoisomerase; 2-C-methyl-D-erythritol 4-phosphate synthase [H]

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MQKRLTILGSTGSIGDSTLDVVARHPDRFSVYALTAHRNGDKLVEQCLRFAPEVAVVGDAATAAQVEAKLRAAGSRTQVA
YGPEALVQVAGAGGCDTVVAAIVGAAGLPSSLAAARAGKRILLANKESLVMSGSIFMDAVRDHGASLLPVDSEHNAIFQC
MPRDIAEHGGIEKIIVTASGGPFRTREPATLADVTPEQACKHPNWSMGRKISVDSATMMNKGLEVIEAHWIFGLPSSRID
VLIHPQSVIHSLVSYKDGSVLAQLGNPDMRTPIAHALAFPERVDAGVAQLDLAQIATLTFEQPDLERFPCLALAIQALDA
GGVASTVLNAANELAVDAFLERRIGFMDIARTVDAVLNSLTNREAAGLDDVLAADAEARRAAAAVIAGLPVPRAERAA

Sequences:

>Translated_398_residues
MQKRLTILGSTGSIGDSTLDVVARHPDRFSVYALTAHRNGDKLVEQCLRFAPEVAVVGDAATAAQVEAKLRAAGSRTQVA
YGPEALVQVAGAGGCDTVVAAIVGAAGLPSSLAAARAGKRILLANKESLVMSGSIFMDAVRDHGASLLPVDSEHNAIFQC
MPRDIAEHGGIEKIIVTASGGPFRTREPATLADVTPEQACKHPNWSMGRKISVDSATMMNKGLEVIEAHWIFGLPSSRID
VLIHPQSVIHSLVSYKDGSVLAQLGNPDMRTPIAHALAFPERVDAGVAQLDLAQIATLTFEQPDLERFPCLALAIQALDA
GGVASTVLNAANELAVDAFLERRIGFMDIARTVDAVLNSLTNREAAGLDDVLAADAEARRAAAAVIAGLPVPRAERAA
>Mature_398_residues
MQKRLTILGSTGSIGDSTLDVVARHPDRFSVYALTAHRNGDKLVEQCLRFAPEVAVVGDAATAAQVEAKLRAAGSRTQVA
YGPEALVQVAGAGGCDTVVAAIVGAAGLPSSLAAARAGKRILLANKESLVMSGSIFMDAVRDHGASLLPVDSEHNAIFQC
MPRDIAEHGGIEKIIVTASGGPFRTREPATLADVTPEQACKHPNWSMGRKISVDSATMMNKGLEVIEAHWIFGLPSSRID
VLIHPQSVIHSLVSYKDGSVLAQLGNPDMRTPIAHALAFPERVDAGVAQLDLAQIATLTFEQPDLERFPCLALAIQALDA
GGVASTVLNAANELAVDAFLERRIGFMDIARTVDAVLNSLTNREAAGLDDVLAADAEARRAAAAVIAGLPVPRAERAA

Specific function: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) [H]

COG id: COG0743

COG function: function code I; 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DXR family [H]

Homologues:

Organism=Escherichia coli, GI1786369, Length=388, Percent_Identity=57.7319587628866, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003821
- InterPro:   IPR013644
- InterPro:   IPR013512
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08436 DXP_redisom_C; PF02670 DXP_reductoisom [H]

EC number: =1.1.1.267 [H]

Molecular weight: Translated: 41735; Mature: 41735

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRLTILGSTGSIGDSTLDVVARHPDRFSVYALTAHRNGDKLVEQCLRFAPEVAVVGDA
CCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEECCC
ATAAQVEAKLRAAGSRTQVAYGPEALVQVAGAGGCDTVVAAIVGAAGLPSSLAAARAGKR
HHHHHHHHHHHHCCCCCEEEECHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCE
ILLANKESLVMSGSIFMDAVRDHGASLLPVDSEHNAIFQCMPRDIAEHGGIEKIIVTASG
EEEECCCCEEEECHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHHCCCCEEEEEEECC
GPFRTREPATLADVTPEQACKHPNWSMGRKISVDSATMMNKGLEVIEAHWIFGLPSSRID
CCCCCCCCCCHHCCCHHHHHCCCCCCCCCEEECCHHHHHHCCHHHEEEEEEECCCCCCEE
VLIHPQSVIHSLVSYKDGSVLAQLGNPDMRTPIAHALAFPERVDAGVAQLDLAQIATLTF
EEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCHHHHHCCHHHHHHHHHHHHCC
EQPDLERFPCLALAIQALDAGGVASTVLNAANELAVDAFLERRIGFMDIARTVDAVLNSL
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TNREAAGLDDVLAADAEARRAAAAVIAGLPVPRAERAA
CCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure
MQKRLTILGSTGSIGDSTLDVVARHPDRFSVYALTAHRNGDKLVEQCLRFAPEVAVVGDA
CCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEECCC
ATAAQVEAKLRAAGSRTQVAYGPEALVQVAGAGGCDTVVAAIVGAAGLPSSLAAARAGKR
HHHHHHHHHHHHCCCCCEEEECHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCE
ILLANKESLVMSGSIFMDAVRDHGASLLPVDSEHNAIFQCMPRDIAEHGGIEKIIVTASG
EEEECCCCEEEECHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHHCCCCEEEEEEECC
GPFRTREPATLADVTPEQACKHPNWSMGRKISVDSATMMNKGLEVIEAHWIFGLPSSRID
CCCCCCCCCCHHCCCHHHHHCCCCCCCCCEEECCHHHHHHCCHHHEEEEEEECCCCCCEE
VLIHPQSVIHSLVSYKDGSVLAQLGNPDMRTPIAHALAFPERVDAGVAQLDLAQIATLTF
EEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCHHHHHCCHHHHHHHHHHHHCC
EQPDLERFPCLALAIQALDAGGVASTVLNAANELAVDAFLERRIGFMDIARTVDAVLNSL
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TNREAAGLDDVLAADAEARRAAAAVIAGLPVPRAERAA
CCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA