Click here to switch to the map view.

The map label for this gene is frr [H]

Identifier: 238026905

GI number: 238026905

Start: 1398344

End: 1398904

Strand: Direct

Name: frr [H]

Synonym: bglu_1g12750

Alternate gene names: 238026905

Gene position: 1398344-1398904 (Clockwise)

Preceding gene: 238026904

Following gene: 238026906

Centisome position: 35.8

GC content: 63.46

Gene sequence:

>561_bases
ATGAGTGTCGCTGATGTGAAAAAGGGCGTCGAGCAGAAGATGCAGCGCTCGATCGAAGCGTTCAAGAACGATCTGGCGAA
GATCCGCACGGGGCGCGCGCACACGGGCCTGCTCGATCACGTGCAGGTCGACTACTACGGCTCGATGGTGCCGATCTCGC
AGGTCGCGAACCTGACGCTCGTCGATGCACGCACGATCGGTGTGCAGCCGTGGGAAAAGCCGATGGTCGCGAAGGTCGAG
AAGGCCATCCGCGAGTCGGACCTGGGCTTGAACCCGGCCACCTCCGGCGACATGATCCGCGTGCCGATGCCCGCGCTGAC
CGAAGAGCGCCGCCGCGAGCTGACCAAGGTGGTCAAGAGCGAAGGCGAGACGGCCAAGGTGGCCGTGCGCAACCTGCGCC
GCGACGCGAACGAGCAGTTGAAGAAGCTCGTCAAGGACAAGGAAATCTCGGAAGACGACGAGCGCCGCGCCAGCGACGAA
GTCCAGAAGCTGACCGACAAGCACGTCGCCGAAATCGACAAGCTGGTGCAGGCGAAGGACGCCGAGATCATGACGGTCTG
A

Upstream 100 bases:

>100_bases
TCGTTCACGTGTAAACTCACGCCGATTCGGGCCCGGCATGACGCCGTCGGCGGGATGCGGGCCTGTGTCTTTTCGAAGGT
TCGAAGGTTCGGAGGTTGAA

Downstream 100 bases:

>100_bases
CGCAGCTTTGCGCGCGTCCGTTGCACTTTTTCCCGCAGTTACAGTCTCAGCGGCCATGACTCATACCAGCTCTACCGTTC
GCGTGCCCGACGTTGCCGCC

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSVADVKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIGVQPWEKPMVAKVE
KAIRESDLGLNPATSGDMIRVPMPALTEERRRELTKVVKSEGETAKVAVRNLRRDANEQLKKLVKDKEISEDDERRASDE
VQKLTDKHVAEIDKLVQAKDAEIMTV

Sequences:

>Translated_186_residues
MSVADVKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIGVQPWEKPMVAKVE
KAIRESDLGLNPATSGDMIRVPMPALTEERRRELTKVVKSEGETAKVAVRNLRRDANEQLKKLVKDKEISEDDERRASDE
VQKLTDKHVAEIDKLVQAKDAEIMTV
>Mature_185_residues
SVADVKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIGVQPWEKPMVAKVEK
AIRESDLGLNPATSGDMIRVPMPALTEERRRELTKVVKSEGETAKVAVRNLRRDANEQLKKLVKDKEISEDDERRASDEV
QKLTDKHVAEIDKLVQAKDAEIMTV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Homo sapiens, GI20270317, Length=176, Percent_Identity=32.9545454545455, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI291042689, Length=150, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1786368, Length=182, Percent_Identity=52.7472527472528, Blast_Score=204, Evalue=3e-54,
Organism=Drosophila melanogaster, GI24661488, Length=177, Percent_Identity=29.3785310734463, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 20873; Mature: 20742

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVADVKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCE
VDARTIGVQPWEKPMVAKVEKAIRESDLGLNPATSGDMIRVPMPALTEERRRELTKVVKS
ECHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHC
EGETAKVAVRNLRRDANEQLKKLVKDKEISEDDERRASDEVQKLTDKHVAEIDKLVQAKD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AEIMTV
CCEECC
>Mature Secondary Structure 
SVADVKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCE
VDARTIGVQPWEKPMVAKVEKAIRESDLGLNPATSGDMIRVPMPALTEERRRELTKVVKS
ECHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHC
EGETAKVAVRNLRRDANEQLKKLVKDKEISEDDERRASDEVQKLTDKHVAEIDKLVQAKD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AEIMTV
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA