| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pyrH [H]
Identifier: 238026904
GI number: 238026904
Start: 1397478
End: 1398257
Strand: Direct
Name: pyrH [H]
Synonym: bglu_1g12740
Alternate gene names: 238026904
Gene position: 1397478-1398257 (Clockwise)
Preceding gene: 238026903
Following gene: 238026905
Centisome position: 35.77
GC content: 65.77
Gene sequence:
>780_bases TTGCCCGAATCAGTATTTCGCCCCTACAGTTCGTGGTTGTCATCCTTTCGTCGCTTGGAAGCCTCTATGCCCAATGCCTA TAAACGCATCCTCCTCAAACTTTCCGGCGAAGCGCTGATGGGCGACGATGCCTTCGGCATCAACCGCGCGACGATCGAAC GGATGGTGGCGGACATTGCCGAAGTGGTGCGGCTCGGCACGCAGCTGGCCGTGGTGATCGGCGGCGGCAATATTTTCCGC GGCGTGGCGGGCGGCGCGGCCGGCATGGACCGCGCGACGGCGGACTACATGGGGATGCTGGCCACCATGATGAACGCGCT GGCGCTGCAGGACGCGATGCGCCACGCCGGCATCGAGGCGCGCGTGCAGTCGGCGCTGCGCATGGACCAGGTGGTCGAGC CGTACATCCGGCCCCGCGCGATCCGTCAGCTCGAGGAAGGGCGCGTGGTGATCTTCGCCGCCGGCACCGGCAACCCGTTC TTCACGACCGACACGGCCGCCGCGCTGCGCGGCTCGGAAGTCGGGGCCGAGGTCGTGCTGAAGGCCACCAAGGTCGATGG CGTCTACACGGCCGACCCGAAGAAGGACCCGTCGGCCACGCGCTATGCATCGATCAGCTTCGATGAGGCGATCGGCCGCA ATCTGCAGGTGATGGACGCGACGGCGTTCGCGCTGTGCCGCGACCAGAAGCTGCCGATCCGCGTGTTCTCGATCAACAAG CCCGGTGCACTCAAGCGCATCGTGCAGGGTGAGGACGAGGGTACGCTCGTTCACGTGTAA
Upstream 100 bases:
>100_bases CCGTCAGCAGCAAGGTTGGACCCGCGGCGGGCGCTCGCTCCGCCGCGGTTCGGCAGCGCCGCGCGCCGCGGCCTTCGCGG GCCGCGCAATTTGGCGGCGC
Downstream 100 bases:
>100_bases ACTCACGCCGATTCGGGCCCGGCATGACGCCGTCGGCGGGATGCGGGCCTGTGTCTTTTCGAAGGTTCGAAGGTTCGGAG GTTGAAATGAGTGTCGCTGA
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPESVFRPYSSWLSSFRRLEASMPNAYKRILLKLSGEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFR GVAGGAAGMDRATADYMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAGTGNPF FTTDTAAALRGSEVGAEVVLKATKVDGVYTADPKKDPSATRYASISFDEAIGRNLQVMDATAFALCRDQKLPIRVFSINK PGALKRIVQGEDEGTLVHV
Sequences:
>Translated_259_residues MPESVFRPYSSWLSSFRRLEASMPNAYKRILLKLSGEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFR GVAGGAAGMDRATADYMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAGTGNPF FTTDTAAALRGSEVGAEVVLKATKVDGVYTADPKKDPSATRYASISFDEAIGRNLQVMDATAFALCRDQKLPIRVFSINK PGALKRIVQGEDEGTLVHV >Mature_258_residues PESVFRPYSSWLSSFRRLEASMPNAYKRILLKLSGEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRG VAGGAAGMDRATADYMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAGTGNPFF TTDTAAALRGSEVGAEVVLKATKVDGVYTADPKKDPSATRYASISFDEAIGRNLQVMDATAFALCRDQKLPIRVFSINKP GALKRIVQGEDEGTLVHV
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=231, Percent_Identity=58.8744588744589, Blast_Score=283, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 27985; Mature: 27853
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESVFRPYSSWLSSFRRLEASMPNAYKRILLKLSGEALMGDDAFGINRATIERMVADIA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH EVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATADYMGMLATMMNALALQDAMRHAGIEA HHHHCCCEEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAGTGNPFFTTDTAAALRGSEVGAEVVL HHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCEECCHHHHHCCCCCCHHHEE KATKVDGVYTADPKKDPSATRYASISFDEAIGRNLQVMDATAFALCRDQKLPIRVFSINK EEEECCCEEECCCCCCCCCCEEEECCHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEEECC PGALKRIVQGEDEGTLVHV CHHHHHHHCCCCCCCEEEC >Mature Secondary Structure PESVFRPYSSWLSSFRRLEASMPNAYKRILLKLSGEALMGDDAFGINRATIERMVADIA CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHH EVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATADYMGMLATMMNALALQDAMRHAGIEA HHHHCCCEEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAGTGNPFFTTDTAAALRGSEVGAEVVL HHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCEECCHHHHHCCCCCCHHHEE KATKVDGVYTADPKKDPSATRYASISFDEAIGRNLQVMDATAFALCRDQKLPIRVFSINK EEEECCCEEECCCCCCCCCCEEEECCHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEEECC PGALKRIVQGEDEGTLVHV CHHHHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA